RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 STAMBPO95630 424 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 FYNP06241 537 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 CELA3AP09093 270 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 FAM228BP0C875 321 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 RBP3P10745 1247 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 P4HA1P13674 534 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 NAGAP17050 411 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 CES1P23141 567 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 IFNA8P32881 189 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ALDH3B2P48448 385 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 KRT6CP48668 564 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 SLC5A3P53794 718 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 BASP1P80723 227 aaKnown RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 MYBPC1Q00872 1141 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 GHRHRQ02643 423 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 BTKQ06187 659 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ACAP1Q15027 740 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 PDK4Q16654 411 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 RGS21Q2M5E4 152 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 PEX26Q7Z412 305 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 IRF2BP2Q7Z5L9 587 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 NATD1Q8N6N6 113 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 C1orf127Q8N9H9 656 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 TEPSINQ96N21 525 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 PSKH2Q96QS6 385 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 Q9H521 79 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ELP3Q9H9T3 547 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 SLCO1B3Q9NPD5 702 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 UBN1Q9NPG3 1134 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 KCNH7Q9NS40 1196 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ARMC1Q9NVT9 282 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 GPRC5DQ9NZD1 345 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 KANSL3Q9P2N6 904 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 CDH7Q9ULB5 785 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 EXOC7Q9UPT5 735 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 B3GNT3Q9Y2A9 372 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 GTPBP10A4D1E9 387 aaKnown RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 KRBA1A5PL33 1030 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 TSPAN6O43657 245 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 EGFRP00533 1210 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 C6orf222P0C671 652 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 PMLP29590 882 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 PSMC2P35998 433 aaKnown RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 FDFT1P37268 417 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 SLC18A1P54219 525 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 NCKAP1LP55160 1127 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ATP6V0D1P61421 351 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 MAPK7Q13164 816 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ATP1A4Q13733 1029 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 NFE2Q16621 373 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 LPCAT4Q643R3 524 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ADGRD1Q6QNK2 874 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 KYAT3Q6YP21 454 aaKnown RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 LPCAT2Q7L5N7 544 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 THNSL2Q86YJ6 484 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 CLVS1Q8IUQ0 354 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 KSR1Q8IVT5 923 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 FAM178BQ8IXR5 827 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 ICA1LQ8NDH6 482 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 IL31RAQ8NI17 732 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 BRSK1Q8TDC3 778 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 GDPD5Q8WTR4 605 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 DHRS9Q9BPW9 319 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 OSBPL8Q9BZF1 889 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 LIN28AQ9H9Z2 209 aaKnown RBP9.11□□□□□ -0.95
ATG4A-203ENST00000372232 PLA2G4CQ9UP65 541 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 UBE4BO95155 1302 aa9.11□□□□□ -0.95
ATG4A-203ENST00000372232 CLOCKO15516 846 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 DHX15O43143 795 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 FOXD2O60548 495 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF23P17027 643 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 RPL17P18621 184 aaKnown RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 M6PRP20645 277 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 PEX2P28328 305 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF280AP59817 542 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 IRX4P78413 519 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ADAM17P78536 824 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 NIPAL4Q0D2K0 466 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 TNFAIP1Q13829 316 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 COG2Q14746 738 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 GRIN2CQ14957 1233 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 PSMD6Q15008 389 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 C10orf76Q5T2E6 689 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 OGFOD2Q6N063 350 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 CCDC62Q6P9F0 684 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 RNF111Q6ZNA4 994 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 RFX8Q6ZV50 586 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 STXBP4Q6ZWJ1 553 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 NIPA1Q7RTP0 329 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF571Q7Z3V5 609 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-203ENST00000372232 HEATR4Q86WZ0 1026 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 TMPRSS6Q8IU80 811 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 LURAP1LQ8IV03 231 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 SPARTQ8N0X7 666 aa9.1□□□□□ -0.95
ATG4A-203ENST00000372232 CPXCR1Q8N123 301 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms