RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 MRPS26Q9BYN8 205 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 OSBPL8Q9BZF1 889 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 OSBPL6Q9BZF3 934 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 INO80BQ9C086 356 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SPATC1LQ9H0A9 340 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 MRPL46Q9H2W6 279 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 KCTD10Q9H3F6 313 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SMARCAD1Q9H4L7 1026 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 GPAMQ9HCL2 828 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PAK6Q9NQU5 681 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PDLIM7Q9NR12 457 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TRNAU1APQ9NX07 287 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SCHIP1Q9P0W5 487 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 ANKFY1Q9P2R3 1169 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SLC9A2Q9UBY0 812 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SLC7A8Q9UHI5 535 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CPA4Q9UI42 421 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 ADAMTS6Q9UKP5 1117 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PCDHGB4Q9UN71 923 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 FZD1Q9UP38 647 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TMA7Q9Y2S6 64 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 RBMX2Q9Y388 322 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PCDHGB5Q9Y5G0 923 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CEPT1Q9Y6K0 416 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SZT2Q5T011 3432 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 MYH9P35579 1960 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 FAM47E-STBD1D6RA91 191 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 H3BRJ5 948 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 ITM2AO43736 263 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SLC37A4O43826 429 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 HBP1O60381 514 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TM7SF2O76062 418 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 IL18RAPO95256 599 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CD48P09326 243 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PABPC1P11940 636 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 ALAS1P13196 640 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CDH3P22223 829 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CTNNA2P26232 953 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PEX2P28328 305 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PMLP29590 882 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PIK3CAP42336 1068 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 KCNJ1P48048 391 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 GALCP54803 685 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SNX16P57768 344 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 XIAPP98170 497 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CD300CQ08708 224 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 ZBTB17Q13105 803 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PDE1CQ14123 709 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 KRT81Q14533 505 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TTLL4Q14679 1199 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 KCTD2Q14681 263 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TMED2Q15363 201 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TLR1Q15399 786 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SLC1A5Q15758 541 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 AAK1Q2M2I8 961 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 DCAF6Q58WW2 860 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 NBPF12Q5TAG4 269 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TMC7Q7Z402 723 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PRUNE1Q86TP1 453 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TTC7BQ86TV6 843 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 GPBP1Q86WP2 473 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CATSPER3Q86XQ3 398 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 MAP4K3Q8IVH8 894 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TRIM59Q8IWR1 403 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 ICA1LQ8NDH6 482 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 GPRC5AQ8NFJ5 357 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 GDPD5Q8WTR4 605 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 MAML1Q92585 1016 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SKA1Q96BD8 255 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 MTBPQ96DY7 904 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 ANKRD36BP1Q96IX9 119 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CEP295NLQ96MC4 621 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TTC25Q96NG3 672 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 GCNAQ96QF7 691 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 RMDN3Q96TC7 470 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 POP1Q99575 1024 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 PLVAPQ9BX97 442 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 CEP44Q9C0F1 390 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 GANQ9H2C0 597 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 S100A14Q9HCY8 104 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 JPH1Q9HDC5 661 aaPredicted RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 TBC1D23Q9NUY8 699 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SLC38A7Q9NVC3 462 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 RSL24D1Q9UHA3 163 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 FRMD4BQ9Y2L6 1034 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 COQ4Q9Y3A0 265 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 MAD1L1Q9Y6D9 718 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 BAZ2BQ9UIF8 2168 aaKnown RBP4.12□□□□□ -1.75
CNGA1-201ENST00000358519 COL4A6Q14031 1691 aa4.12□□□□□ -1.75
CNGA1-201ENST00000358519 MKI67P46013 3256 aaKnown RBP4.11□□□□□ -1.75
CNGA1-201ENST00000358519 IGKV6-21A0A0C4DH24 114 aa4.11□□□□□ -1.75
CNGA1-201ENST00000358519 CLRN2A0PK11 232 aa4.11□□□□□ -1.75
CNGA1-201ENST00000358519 ARHGEF37A1IGU5 675 aa4.11□□□□□ -1.75
CNGA1-201ENST00000358519 TRIM64CA6NLI5 447 aa4.11□□□□□ -1.75
CNGA1-201ENST00000358519 K7EPI3 171 aa4.11□□□□□ -1.75
CNGA1-201ENST00000358519 PRPF4O43172 522 aaKnown RBP eCLIP4.11□□□□□ -1.75
CNGA1-201ENST00000358519 DENRO43583 198 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms