RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PLIN5Q00G26 463 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 LGALS3BPQ08380 585 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 GRAPQ13588 217 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 GLRA4Q5JXX5 417 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MFSD5Q6N075 450 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 KRT77Q7Z794 578 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SCN4BQ8IWT1 228 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 GRAPLQ8TC17 118 aaPredicted RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SH3KBP1Q96B97 665 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 COA1Q9GZY4 146 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF221Q9UK13 617 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 LAMA4Q16363 1823 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 URB1O60287 2271 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MSH3P20585 1137 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 RRM1P23921 792 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 GRIA3P42263 894 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 GSSP48637 474 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 CCNG1P51959 295 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 PKNOX1P55347 436 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 EPC2Q52LR7 807 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 MRNIPQ6NTE8 343 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SPOCD1Q6ZMY3 1216 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 PABPC5Q96DU9 382 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF624Q9P2J8 865 aaPredicted RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 BIRC5O15392 142 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SEMA3DO95025 777 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 TPBGLP0DKB5 382 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SLC26A3P40879 764 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ACLYP53396 1101 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 PWP1Q13610 501 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ACVR2BQ13705 512 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 QPCTQ16769 361 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ZSWIM7Q19AV6 140 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 CNPY1Q3B7I2 92 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 PACS1Q6VY07 963 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ILDR1Q86SU0 546 aaPredicted RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 VMP1Q96GC9 406 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 APOL5Q9BWW9 433 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 SENP2Q9HC62 589 aa8.97□□□□□ -0.97
COL6A6-201ENST00000358511 PRPF19Q9UMS4 504 aaKnown RBP8.97□□□□□ -0.97
COL6A6-201ENST00000358511 VCLP18206 1134 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 SSTR1P30872 391 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 BMPR2Q13873 1038 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 GPR162Q16538 588 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 SBK1Q52WX2 424 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 FAXCQ5TGI0 409 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 FAM13CQ8NE31 585 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 WDR36Q8NI36 951 aaKnown RBP8.96□□□□□ -0.97
COL6A6-201ENST00000358511 PTCD3Q96EY7 689 aaKnown RBP8.96□□□□□ -0.97
COL6A6-201ENST00000358511 GIN1Q9NXP7 522 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 ANAPC2Q9UJX6 822 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 DUSP12Q9UNI6 340 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 TRIM17Q9Y577 477 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 GPC6Q9Y625 555 aaPredicted RBP8.96□□□□□ -0.97
COL6A6-201ENST00000358511 PGAM1P18669 254 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 UBAP2LQ14157 1087 aaKnown RBP8.96□□□□□ -0.97
COL6A6-201ENST00000358511 SYTL3Q4VX76 610 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 EEPD1Q7L9B9 569 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 CHMP1BQ7LBR1 199 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 CYP4Z2PQ8N1L4 340 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 VCPIP1Q96JH7 1222 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 PIF1Q9H611 641 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 WWOXQ9NZC7 414 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 CLRN2A0PK11 232 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 A8MUI8 341 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 KBTBD13C9JR72 458 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 PSMA3P25788 255 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 RGS7P49802 495 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 RAB25P57735 213 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 ISLR2Q6UXK2 745 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 IQCKQ8N0W5 287 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 ETNPPLQ8TBG4 499 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 RUSC1Q9BVN2 902 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 FAM49AQ9H0Q0 323 aaPredicted RBP8.96□□□□□ -0.97
COL6A6-201ENST00000358511 MTMR4Q9NYA4 1195 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 POLIQ9UNA4 740 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 CACNA1CQ13936 2221 aa8.96□□□□□ -0.97
COL6A6-201ENST00000358511 FAM237BA0A1B0GVD1 139 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 FAM220BPB1ANY3 271 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 KLHL18O94889 574 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CHI3L1P36222 383 aaPredicted RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 PTRHD1Q6GMV3 140 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 TYW3Q6IPR3 259 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CDC73Q6P1J9 531 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CASP12Q6UXS9 341 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CLNKQ7Z7G1 428 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 ZNF605Q86T29 641 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 PQLC1Q8N2U9 271 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 AADATQ8N5Z0 425 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 MYDGFQ969H8 173 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 CYP4F12Q9HCS2 524 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 AP3M1Q9Y2T2 418 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 KIF1AQ12756 1690 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 MRASO14807 208 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 LYNP07948 512 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 ETS1P14921 441 aa8.96□□□□□ -0.98
COL6A6-201ENST00000358511 RPL14P50914 215 aaKnown RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 INO80DQ53TQ3 878 aaPredicted RBP8.96□□□□□ -0.98
COL6A6-201ENST00000358511 AGXT2Q9BYV1 514 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms