RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ILDR2Q71H61 639 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 MRPL48Q96GC5 212 aaKnown RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 SRPK1Q96SB4 655 aaKnown RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 WDR41Q9HAD4 459 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 RABGEF1Q9UJ41 708 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 LRCH1Q9Y2L9 728 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 DYRK1BQ9Y463 629 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 PCDHB5Q9Y5E4 795 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 CHADO15335 359 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 RASSF9O75901 435 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 UPP2O95045 317 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 VTNP04004 478 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 MBL2P11226 248 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 MAP3K7CLP57077 242 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 GRIK4Q16099 956 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 CYP51A1Q16850 503 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 MFSD7Q6UXD7 560 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 PLEKHM3Q6ZWE6 761 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 MIB1Q86YT6 1006 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 SPATA17Q96L03 361 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 LBHD1Q9BQE6 289 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 DMAP1Q9NPF5 467 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 SNX13Q9Y5W8 968 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 RTN3O95197 1032 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 URODP06132 367 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 TGM3Q08188 693 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 AMHR2Q16671 573 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 N4BP2L1Q5TBK1 243 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 OVOS1Q6IE37 1185 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 TCP10LQ8TDR4 215 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 STARD8Q92502 1023 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 MAGED4Q96JG8 741 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 COMMD8Q9NX08 183 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 DDX43Q9NXZ2 648 aaKnown RBP12.03□□□□□ -0.48
COL9A1-202ENST00000357250 KCNK4Q9NYG8 393 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 LNPEPQ9UIQ6 1025 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
COL9A1-202ENST00000357250 A0A0U1RQJ8 604 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.02□□□□□ -0.48
COL9A1-202ENST00000357250 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 RAMP2O60895 175 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 ATP6V1G2O95670 118 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 FASP25445 335 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 SLC1A6P48664 564 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 RTP1P59025 263 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 CAMK2GQ13555 558 aaPredicted RBP12.02□□□□□ -0.48
COL9A1-202ENST00000357250 ZBTB49Q6ZSB9 765 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 KCNMB4Q86W47 210 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 TSPAN18Q96SJ8 248 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 PORCNQ9H237 461 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 NMRK2Q9NPI5 230 aa12.02□□□□□ -0.48
COL9A1-202ENST00000357250 FCHO1O14526 889 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 MICAL2O94851 1124 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 CYP1A2P05177 515 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 EPHB3P54753 998 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 SLC34A1Q06495 639 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 FUT2Q10981 343 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 TBL3Q12788 808 aaKnown RBP12.02□□□□□ -0.49
COL9A1-202ENST00000357250 PARP6Q2NL67 630 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 LRRC49Q8IUZ0 686 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 TTC30BQ8N4P2 665 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 EPS8L1Q8TE68 723 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 DLG3Q92796 817 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 OXNAD1Q96HP4 312 aaPredicted RBP12.02□□□□□ -0.49
COL9A1-202ENST00000357250 MTG1Q9BT17 334 aaPredicted RBP12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ENTPD7Q9NQZ7 604 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 AHSPQ9NZD4 102 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 TMCO1Q9UM00 188 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 AKAP12Q02952 1782 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ASTN2O75129 1339 aaPredicted RBP12.02□□□□□ -0.49
COL9A1-202ENST00000357250 SIGLEC16A6NMB1 481 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ENO4A6NNW6 628 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 CLPTM1O96005 669 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 SOX6P35712 828 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 EFEMP1Q12805 493 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 PLD1Q13393 1074 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 CSHL1Q14406 222 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 SLC45A4Q5BKX6 768 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 MOB2Q70IA6 237 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 POP5Q969H6 163 aaKnown RBP12.02□□□□□ -0.49
COL9A1-202ENST00000357250 HSFY1Q96LI6 401 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 BDH2Q9BUT1 245 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ELOVL6Q9H5J4 265 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 TAS2R13Q9NYV9 303 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 VPS28Q9UK41 221 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 CROTQ9UKG9 612 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 MGAT4DA6NG13 374 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 CCDC159P0C7I6 412 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ZNF7P17097 686 aaPredicted RBP12.02□□□□□ -0.49
COL9A1-202ENST00000357250 GRK3P35626 688 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 RAP1GAPP47736 663 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 CNGA2Q16280 664 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 ANKS6Q68DC2 871 aa12.02□□□□□ -0.49
COL9A1-202ENST00000357250 LRRN4CLQ8ND94 238 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms