RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ZMPSTE24O75844 475 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 KRT34O76011 436 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 CST3P01034 146 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ERBB2P04626 1255 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 APRTP07741 180 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 NCF2P19878 526 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 RAB15P59190 212 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 FLOT2Q14254 428 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 VWA5B1Q5TIE3 1220 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 PAOXQ6QHF9 649 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 PACS1Q6VY07 963 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 BNC2Q6ZN30 1099 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 TRMT1LQ7Z2T5 733 aaKnown RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 RNF168Q8IYW5 571 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 MPP5Q8N3R9 675 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 EMC1Q8N766 993 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 PLD5Q8N7P1 536 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 JDP2Q8WYK2 163 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ISL2Q96A47 359 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 CPXM1Q96SM3 734 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 PKP2Q99959 881 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF341Q9BYN7 854 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 GCOM2Q9BZD3 368 aaPredicted RBP9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF385DQ9H6B1 395 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 PLGRKTQ9HBL7 147 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 XPNPEP3Q9NQH7 507 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 ASNSD1Q9NWL6 643 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 RNF11Q9Y3C5 154 aa9.94□□□□□ -0.82
HOXA1-201ENST00000343060 KANSL1LA0AUZ9 987 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 BCAS2O75934 225 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ZBED1O96006 694 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 THRAP10827 490 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF26P17031 533 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 XRCC1P18887 633 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 EIF2AK2P19525 551 aaKnown RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PIK3R1P27986 724 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 RBL1P28749 1068 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 MAGEA12P43365 314 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ASPAP45381 313 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 CDH6P55285 790 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 MYL6P60660 151 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 TUBA4AP68366 448 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 DPYSQ14117 519 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 SPIDRQ14159 915 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 RFTN1Q14699 578 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 HERC3Q15034 1050 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 SLC9A4Q6AI14 798 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 CARM1Q86X55 608 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PGAM4Q8N0Y7 254 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 LZTR1Q8N653 840 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 TSPAN14Q8NG11 270 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 NLRP7Q8WX94 980 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ATP2A3Q93084 1043 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 HSPBAP1Q96EW2 488 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF597Q96LX8 424 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 TAAR1Q96RJ0 339 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PDCD2LQ9BRP1 358 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 TRIM56Q9BRZ2 755 aaKnown RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 TDRD3Q9H7E2 651 aaKnown RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 THSD7AQ9UPZ6 1657 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 COL11A2P13942 1736 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 TRIM64CA6NLI5 447 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 TMEM114B3SHH9 223 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF701M0R085 212 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 C8BP07358 591 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 RALBP11234 206 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PSMC3P17980 439 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ADORA2AP29274 412 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ADSLP30566 484 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ALDH1B1P30837 517 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 MAGEA10P43363 369 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 NAMPTP43490 491 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PRKCEQ02156 737 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 XRRA1Q6P2D8 792 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 LRRC8BQ6P9F7 803 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PATL1Q86TB9 770 aaKnown RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 SETD3Q86TU7 594 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 DSELQ8IZU8 1212 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 CPSF7Q8N684 471 aaKnown RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PQLC3Q8N755 202 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 KYQ8NBH2 561 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 LENG8Q96PV6 779 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 RANBP9Q96S59 729 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 COG4Q9H9E3 785 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 COPS7BQ9H9Q2 264 aaPredicted RBP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 PXMP2Q9NR77 195 aa9.93□□□□□ -0.82
HOXA1-201ENST00000343060 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.93□□□□□ -0.82
HOXA1-201ENST00000343060 A0A1B0GTW7 788 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 RGSL1A5PLK6 1076 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 ZNF487B1APH4 448 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 ACOT8O14734 319 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 MED7O43513 233 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 GCATO75600 419 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 EDN1P05305 212 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 PORP16435 677 aaPredicted RBP9.92□□□□□ -0.82
HOXA1-201ENST00000343060 IL4RP24394 825 aa9.92□□□□□ -0.82
HOXA1-201ENST00000343060 NUDT2P50583 147 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms