RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 KBTBD12Q3ZCT8 623 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 GPR142Q7Z601 462 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PRPF39Q86UA1 669 aaKnown RBP14.32□□□□□ -0.12
SF1-202ENST00000334944 CTAGE3PQ8IX95 158 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PLD5Q8N7P1 536 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 ZBTB8BQ8NAP8 495 aaPredicted RBP14.32□□□□□ -0.12
SF1-202ENST00000334944 ATP11CQ8NB49 1132 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 TTC13Q8NBP0 860 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PCDH19Q8TAB3 1148 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 NPLOC4Q8TAT6 608 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PTCD3Q96EY7 689 aaKnown RBP14.32□□□□□ -0.12
SF1-202ENST00000334944 OLFM3Q96PB7 478 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 RSAD1Q9HA92 442 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 RECQL4O94761 1208 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PABPC4LP0CB38 370 aaKnown RBP14.32□□□□□ -0.12
SF1-202ENST00000334944 PCSK6P29122 969 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 SDC4P31431 198 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 GABRB2P47870 512 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 CCNA1P78396 465 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 GBE1Q04446 702 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 NR1H3Q13133 447 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PDK4Q16654 411 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 KCTD21Q4G0X4 260 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 LRRC8BQ6P9F7 803 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 OLFML1Q6UWY5 402 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PYROXD2Q8N2H3 581 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 NME8Q8N427 588 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PQLC3Q8N755 202 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 DNAJB3Q8WWF6 145 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 USP6NLQ92738 828 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 KHSRPQ92945 711 aaKnown RBP eCLIP14.32□□□□□ -0.121e-8■■■■□ 20.5
SF1-202ENST00000334944 SYT17Q9BSW7 474 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 CEP41Q9BYV8 373 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 DHX35Q9H5Z1 703 aaKnown RBP14.32□□□□□ -0.12
SF1-202ENST00000334944 GBA2Q9HCG7 927 aaPredicted RBP14.32□□□□□ -0.12
SF1-202ENST00000334944 PFDN4Q9NQP4 134 aa14.32□□□□□ -0.12
SF1-202ENST00000334944 PAIP2BQ9ULR5 123 aaKnown RBP14.32□□□□□ -0.12
SF1-202ENST00000334944 SPTLC1O15269 473 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 CCDC166P0CW27 439 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 CDK4P11802 303 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 ZNF24P17028 368 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 BCAR1P56945 870 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 INCA1Q0VD86 236 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 SOWAHAQ2M3V2 549 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 STKLD1Q8NE28 680 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 DENND1AQ8TEH3 1009 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 RNF157Q96PX1 679 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 PANX3Q96QZ0 392 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
SF1-202ENST00000334944 SPON1Q9HCB6 807 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 PCDHGB4Q9UN71 923 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 PCDHGB5Q9Y5G0 923 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 TMEM221A6NGB7 291 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 C2CD2LO14523 706 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
SF1-202ENST00000334944 AQP4P55087 323 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 NOMO1Q15155 1222 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 TAZQ16635 292 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 SLC44A4Q53GD3 710 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 FYB2Q5VWT5 728 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 ZNF554Q86TJ5 538 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 ALYREFQ86V81 257 aaKnown RBP14.31□□□□□ -0.12
SF1-202ENST00000334944 TCP10LQ8TDR4 215 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 MAML3Q96JK9 1138 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 MS4A4AQ96JQ5 239 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 FOXP3Q9BZS1 431 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 VTA1Q9NP79 307 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 DDX43Q9NXZ2 648 aaKnown RBP14.31□□□□□ -0.12
SF1-202ENST00000334944 ANGPTL2Q9UKU9 493 aa14.31□□□□□ -0.12
SF1-202ENST00000334944 PIN4Q9Y237 131 aaKnown RBP14.31□□□□□ -0.12
SF1-202ENST00000334944 TCRBV9S1A1TA0A576 114 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 TRIM43BA6NCK2 446 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 UGT1A9O60656 530 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 GRIA1P42261 906 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 HDAC4P56524 1084 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 BEX3Q00994 111 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 LDLRAD1Q5T700 205 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 SLC35B4Q969S0 331 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 UGT1A7Q9HAW7 530 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 UGT1A10Q9HAW8 530 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 UGT1A8Q9HAW9 530 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 PCDH18Q9HCL0 1135 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 HESX1Q9UBX0 185 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 DOLKQ9UPQ8 538 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 DICER1Q9UPY3 1922 aaKnown RBP14.3□□□□□ -0.12
SF1-202ENST00000334944 MEI4A8MW99 385 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 SORBS2O94875 1100 aaKnown RBP14.3□□□□□ -0.12
SF1-202ENST00000334944 PITX1P78337 314 aaPredicted RBP14.3□□□□□ -0.12
SF1-202ENST00000334944 MED21Q13503 144 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 SEPT7Q16181 437 aaKnown RBP14.3□□□□□ -0.12
SF1-202ENST00000334944 EFHC2Q5JST6 749 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 SH2D4BQ5SQS7 431 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 C1orf146Q5VVC0 180 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 EFCAB3Q8N7B9 438 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 GRIP2Q9C0E4 1043 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 USP29Q9HBJ7 922 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 CPA4Q9UI42 421 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 GMEB1Q9Y692 573 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 CLDN5O00501 218 aa14.3□□□□□ -0.12
SF1-202ENST00000334944 VILLO15195 856 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms