RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ZRANB2O95218 330 aaKnown RBP eCLIP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 ATP5BP06576 529 aaKnown RBP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 SRPRAP08240 638 aaKnown RBP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 TACR2P21452 398 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 CTNNA1P35221 906 aaKnown RBP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 SSR1P43307 286 aaKnown RBP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 TNNT3P45378 269 aaPredicted RBP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 PLK1P53350 603 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 RAD51Q06609 339 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 IFRD2Q12894 506 aaPredicted RBP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 LAMB3Q13751 1172 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 PDK1Q15118 436 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 SDE2Q6IQ49 451 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 GAREM2Q75VX8 874 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 DSG4Q86SJ6 1040 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 SCUBE3Q8IX30 993 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 NDUFAF2Q8N183 169 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 BRD9Q9H8M2 597 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 KCTD5Q9NXV2 234 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 SUN2Q9UH99 717 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 TTC7AQ9ULT0 858 aaPredicted RBP5.35□□□□□ -1.55
LRIT3-201ENST00000327908 FZD10Q9ULW2 581 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 AP4E1Q9UPM8 1137 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 SLC27A6Q9Y2P4 619 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 PCDHA3Q9Y5H8 950 aa5.35□□□□□ -1.55
LRIT3-201ENST00000327908 DRGXA6NNA5 263 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 HEPACAM2A8MVW5 462 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 TMCO5BA8MYB1 307 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 EEF2KO00418 725 aaKnown RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 NEBLO76041 1014 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 STC2O76061 302 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 KRT1P04264 644 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 TUBBP07437 444 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 CORO1AP31146 461 aaKnown RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 CCDC14Q49A88 953 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 RNF219Q5W0B1 726 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 RNF43Q68DV7 783 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 RETSATQ6NUM9 610 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 ARID3BQ8IVW6 561 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 PLPP6Q8IY26 295 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 AHI1Q8N157 1196 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 MAB21L3Q8N8X9 362 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 KCTD6Q8NC69 237 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 RUBCNQ92622 972 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 TMA16Q96EY4 203 aaKnown RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 C2orf49Q9BVC5 232 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 SPTLC3Q9NUV7 552 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 SLC25A13Q9UJS0 675 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 DUSP12Q9UNI6 340 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 IGLV3-10A0A075B6K4 115 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 CCDC188H7C350 402 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 ALOX15BO15296 676 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 PLEKP08567 350 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 PNMA6AP0CW24 399 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 ADH5P11766 374 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 RFC1P35251 1148 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 ACTN2P35609 894 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 NUDT1P36639 197 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 ST8SIA6P61647 398 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 MRPS21P82921 87 aaKnown RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 MESDQ14696 234 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 MS4A13Q5J8X5 152 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 E4F1Q66K89 784 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 BHLHA9Q7RTU4 235 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 HS6ST3Q8IZP7 471 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 ARL14EPQ8N8R7 260 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-201ENST00000327908 SCAMP5Q8TAC9 235 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 FAM84AQ96KN4 292 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 ASB2Q96Q27 587 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 CEP44Q9C0F1 390 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 CRISPLD1Q9H336 500 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 SPHK2Q9NRA0 654 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 TMEM248Q9NWD8 314 aa5.34□□□□□ -1.55
LRIT3-201ENST00000327908 RFXAPO00287 272 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 APOL1O14791 398 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 RFPL2O75678 378 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 BEST1O76090 585 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 CASQ1P31415 396 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 LTBRP36941 435 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 APBA1Q02410 837 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 EIF4EBP2Q13542 120 aaPredicted RBP5.34□□□□□ -1.56
LRIT3-201ENST00000327908 RUNX3Q13761 415 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 PTPN21Q16825 1174 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 WHAMMP3Q1A5X7 153 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 CCDC181Q5TID7 509 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 ITPRIPL1Q6GPH6 555 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 TMCO3Q6UWJ1 677 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 GPRIN1Q7Z2K8 1008 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 ANKS1BQ7Z6G8 1248 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 RAVER1Q8IY67 606 aaKnown RBP5.34□□□□□ -1.56
LRIT3-201ENST00000327908 RTL3Q8N8U3 475 aaKnown RBP5.34□□□□□ -1.56
LRIT3-201ENST00000327908 BBOF1Q8ND07 529 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 SLC46A2Q9BY10 475 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 FRMD8Q9BZ67 464 aaPredicted RBP5.34□□□□□ -1.56
LRIT3-201ENST00000327908 POMKQ9H5K3 350 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 CYTH4Q9UIA0 394 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 SCML1Q9UN30 329 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 GREB1Q4ZG55 1949 aa5.34□□□□□ -1.56
LRIT3-201ENST00000327908 KIF26AQ9ULI4 1882 aaPredicted RBP5.34□□□□□ -1.56
LRIT3-201ENST00000327908 CACNG3O60359 315 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms