RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 CEP290O15078 2479 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 EEF2KO00418 725 aaKnown RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 ATP9AO75110 1047 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 ZCCHC18P0CG32 403 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 NCAM1P13591 858 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 SLC11A2P49281 568 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 STX4Q12846 297 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 TRIM25Q14258 630 aaKnown RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 GRM3Q14832 879 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 DENND1BQ6P3S1 775 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 PACS1Q6VY07 963 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 NET1Q7Z628 596 aaPredicted RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 DSG4Q86SJ6 1040 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 MTDHQ86UE4 582 aaKnown RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 SRFBP1Q8NEF9 429 aaKnown RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 SCN9AQ15858 1988 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 CACNA1IQ9P0X4 2223 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 BTNL10A8MVZ5 291 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 TGDSO95455 350 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 LTKP29376 864 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 RUNDC3AQ59EK9 446 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 ZDHHC13Q8IUH4 622 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 SNX31Q8N9S9 440 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 FAM71DQ8N9W8 422 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 FAM111AQ96PZ2 611 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 OSBPL11Q9BXB4 747 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 RNPEPL1Q9HAU8 725 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 A1CFQ9NQ94 594 aaKnown RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 ASTN2O75129 1339 aaPredicted RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 CEP250Q9BV73 2442 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 ADGRB2O60241 1585 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 SPTBN2O15020 2390 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 NPM3O75607 178 aaKnown RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 TCN1P20061 433 aaPredicted RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 ACTR3P61158 418 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 SEC31BQ9NQW1 1179 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 GGT7Q9UJ14 662 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 TRMT6Q9UJA5 497 aaKnown RBP6.48□□□□□ -1.37
SSH1-202ENST00000326495 HPCAL1P37235 193 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 CAPGP40121 348 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 LHX1P48742 406 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 NR1H2P55055 460 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 PTPAQ15257 358 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 ARHGEF19Q8IW93 802 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 OR8H2Q8N162 312 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 NBPF15Q8N660 670 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 CPA5Q8WXQ8 436 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 ARHGAP28Q9P2N2 729 aa6.48□□□□□ -1.37
SSH1-202ENST00000326495 UBE2QL1A1L167 161 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 RNASEH1O60930 286 aaKnown RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 ODC1P11926 461 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 PECAM1P16284 738 aaPredicted RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 LGALS3BPQ08380 585 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 QRICH1Q2TAL8 776 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 ATP6AP1LQ52LC2 224 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 TMC2Q8TDI7 906 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 PTCD2Q8WV60 388 aaKnown RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 MYOM1P52179 1685 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 CLRN2A0PK11 232 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 WFS1O76024 890 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 RBP3P10745 1247 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 CLUP10909 449 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 TCF4P15884 667 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 PDGFRAP16234 1089 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 CPEP16870 476 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 CPT1AP50416 773 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 RPL26P61254 145 aaKnown RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 RPS6P62753 249 aaKnown RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 CDH18Q13634 790 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 ARHGAP15Q53QZ3 475 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 ZDHHC20Q5W0Z9 365 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 NAIF1Q69YI7 327 aaPredicted RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 TMEM132CQ8N3T6 1108 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 TTLL6Q8N841 843 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 ENGASEQ8NFI3 743 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 EPS8L3Q8TE67 593 aaKnown RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 STK32AQ8WU08 396 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 MYDGFQ969H8 173 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 CPNE1Q99829 537 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 CYP39A1Q9NYL5 469 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 RNF112Q9ULX5 631 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 TP53BP1Q12888 1972 aaPredicted RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 F8W810 466 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 UBOX5O94941 541 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 NFKB1P19838 968 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 GPR162Q16538 588 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 RGS21Q2M5E4 152 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 CCDC149Q6ZUS6 474 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 RFT1Q96AA3 541 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 TMEM120AQ9BXJ8 343 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 IRX2Q9BZI1 471 aaPredicted RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 ASAP1Q9ULH1 1129 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 KLHL20Q9Y2M5 609 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 OASLQ15646 514 aaKnown RBP6.47□□□□□ -1.37
SSH1-202ENST00000326495 WDR72Q3MJ13 1102 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 NT5DC1Q5TFE4 455 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 ANKS6Q68DC2 871 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 REXO1L1PQ8IX06 675 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 GDPD5Q8WTR4 605 aa6.47□□□□□ -1.37
SSH1-202ENST00000326495 GPRASP2Q96D09 838 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms