RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.91■□□□□ 0.3
TPM1-201ENST00000267996 NUDT5Q9UKK9 219 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 MAFFQ9ULX9 164 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 SHOC2Q9UQ13 582 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 INSL6Q9Y581 213 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 SNX10Q9Y5X0 201 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 RAD54BQ9Y620 910 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 MFSD11O43934 449 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 FGF18O76093 207 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 LRIG2O94898 1065 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 HTR7P34969 479 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 CHKAP35790 457 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 NRG1Q02297 640 aaPredicted RBP16.91■□□□□ 0.3
TPM1-201ENST00000267996 SNX30Q5VWJ9 437 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 B4GALNT4Q76KP1 1039 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 RELL1Q8IUW5 271 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 OVCA2Q8WZ82 227 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 FCRL2Q96LA5 508 aaPredicted RBP16.91■□□□□ 0.3
TPM1-201ENST00000267996 ZBP1Q9H171 429 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 NEU3Q9UQ49 428 aa16.91■□□□□ 0.3
TPM1-201ENST00000267996 KCNN4O15554 427 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 PAGE1O75459 146 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 MAP3K6O95382 1288 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 SLC2A3P11169 496 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 HMGA1P17096 107 aaKnown RBP16.9■□□□□ 0.3
TPM1-201ENST00000267996 HOXC13P31276 330 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 PHOSPHO2Q8TCD6 241 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 UBLCP1Q8WVY7 318 aaPredicted RBP16.9■□□□□ 0.3
TPM1-201ENST00000267996 CPT1BQ92523 772 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 MYRFLQ96LU7 910 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 MRPL17Q9NRX2 175 aaKnown RBP16.9■□□□□ 0.3
TPM1-201ENST00000267996 PAK5Q9P286 719 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 PLAAQ9Y263 795 aa16.9■□□□□ 0.3
TPM1-201ENST00000267996 SMAPO00193 183 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 GCATO75600 419 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 IGLV3-27P01718 113 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 CTSAP10619 480 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 OAS2P29728 719 aaKnown RBP16.89■□□□□ 0.29
TPM1-201ENST00000267996 NRLP54845 237 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 CREMQ03060 361 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 PDK1Q15118 436 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 PRKD1Q15139 912 aaPredicted RBP16.89■□□□□ 0.29
TPM1-201ENST00000267996 TRIP4Q15650 581 aaPredicted RBP16.89■□□□□ 0.29
TPM1-201ENST00000267996 C4orf22Q6V702 233 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 CEP128Q6ZU80 1094 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 PDZD4Q76G19 769 aaPredicted RBP16.89■□□□□ 0.29
TPM1-201ENST00000267996 TRMT10CQ7L0Y3 403 aaKnown RBP16.89■□□□□ 0.29
TPM1-201ENST00000267996 HOOK3Q86VS8 718 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 HERC6Q8IVU3 1022 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 PPIL6Q8IXY8 311 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 TCEAL8Q8IYN2 117 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 C7orf61Q8IZ16 206 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 NAT8LQ8N9F0 302 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 PRCCQ92733 491 aaPredicted RBP16.89■□□□□ 0.29
TPM1-201ENST00000267996 C1orf74Q96LT6 269 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 RAD9AQ99638 391 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 SSX2IPQ9Y2D8 614 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 YIPF1Q9Y548 306 aa16.89■□□□□ 0.29
TPM1-201ENST00000267996 C5orf60A6NFR6 353 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 OPA1O60313 960 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 ZNF189O75820 626 aaPredicted RBP16.88■□□□□ 0.29
TPM1-201ENST00000267996 NUDT17P0C025 328 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 CSH1P0DML2 217 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 CSH2P0DML3 217 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
TPM1-201ENST00000267996 TBX4P57082 545 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 EFEMP1Q12805 493 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 HSP90B2PQ58FF3 399 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 TFB1MQ8WVM0 346 aaKnown RBP16.88■□□□□ 0.29
TPM1-201ENST00000267996 AUTS2Q8WXX7 1259 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 ZBED2Q9BTP6 218 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 CYP4F11Q9HBI6 524 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 MARCH2Q9P0N8 246 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 TEX28O15482 410 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 TBX18O95935 607 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 EPHB2P29323 1055 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 FAM193AP78312 1265 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 RING1Q06587 406 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 CBLBQ13191 982 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 CCDC25Q86WR0 208 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 TRMT2BQ96GJ1 504 aaKnown RBP16.88■□□□□ 0.29
TPM1-201ENST00000267996 PWWP2AQ96N64 755 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 CDK5RAP1Q96SZ6 601 aaKnown RBP16.88■□□□□ 0.29
TPM1-201ENST00000267996 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 PHACTR1Q9C0D0 580 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 PRDM12Q9H4Q4 367 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 SLC4A7Q9Y6M7 1214 aa16.88■□□□□ 0.29
TPM1-201ENST00000267996 PPP1R12AO14974 1030 aaPredicted RBP16.87■□□□□ 0.29
TPM1-201ENST00000267996 NCAM2O15394 837 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 RIPK2O43353 540 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 TLR5O60602 858 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 VAV1P15498 845 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 DNAJB2P25686 324 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 MAGEA6P43360 314 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 ALDH1A3P47895 512 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 C10orf120Q5SQS8 335 aa16.87■□□□□ 0.29
TPM1-201ENST00000267996 ANKRD22Q5VYY1 191 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms