RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ATP9AO75110 1047 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 CLTBP09497 229 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 FASP25445 335 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 DNAJB2P25686 324 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 GTF2E2P29084 291 aaKnown RBP11.82□□□□□ -0.52
LAMA4-201ENST00000230538 NDST1P52848 882 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TBX4P57082 545 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 GRIK3Q13003 919 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 TFAP2DQ7Z6R9 452 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 SEPHS2Q99611 448 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 KLHL28Q9NXS3 571 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 VTI1BQ9UEU0 232 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 DUSP12Q9UNI6 340 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 PEX1O43933 1283 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 POMCP01189 267 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 GRK4P32298 578 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 NFIAQ12857 509 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 COX10Q12887 443 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 METTL7BQ6UX53 244 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 SV2AQ7L0J3 742 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 ARRDC4Q8NCT1 418 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 ACTL9Q8TC94 416 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
LAMA4-201ENST00000230538 NKRFO15226 690 aaKnown RBP eCLIP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SERPINF2P08697 491 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 MAPTP10636 758 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PGM5Q15124 567 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 LY6KQ17RY6 165 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 KLHL3Q9UH77 587 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 L1RE1Q9UN81 338 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TIMM13Q9Y5L4 95 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 CCDC154A6NI56 674 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TSPAN3O60637 253 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TRIM13O60858 407 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TNNI3P19429 210 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 MGAT1P26572 445 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 CRABP2P29373 138 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 MAGEA10P43363 369 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 NFE2Q16621 373 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 EID3Q8N140 333 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 FBXO39Q8N4B4 442 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 FNDC5Q8NAU1 212 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 DNERQ8NFT8 737 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 CPNE1Q99829 537 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 RTFDC1Q9BY42 306 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SPRTNQ9H040 489 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 KLHL25Q9H0H3 589 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 FBXO44Q9H4M3 255 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 AVENQ9NQS1 362 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 ANKRD6Q9Y2G4 727 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 FRMPD1Q5SYB0 1578 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 ZNF862O60290 1169 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 KPNA6O60684 536 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 RAMP2O60895 175 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 CSDE1O75534 798 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PSMB9P28065 219 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 ELK3P41970 407 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PRKAA1Q13131 559 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 GRIK4Q16099 956 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 GSTA3Q16772 222 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 ZDHHC17Q8IUH5 632 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 EPHX4Q8IUS5 362 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 WDR36Q8NI36 951 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PIK3R5Q8WYR1 880 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 NMD3Q96D46 503 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TPD52L3Q96J77 140 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 HDHD2Q9H0R4 259 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SERHL2Q9H4I8 314 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SERHLQ9NQF3 203 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PIH1D1Q9NWS0 290 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PCDHB12Q9Y5F1 795 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 FAM153BP0C7A2 387 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 OR1E1P30953 314 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 FAM153CQ494X1 144 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 OVOS1Q6IE37 1185 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SPPL2AQ8TCT8 520 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 RNFT2Q96EX2 444 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 EHD4Q9H223 541 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 STARD7Q9NQZ5 370 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SETD4Q9NVD3 440 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TDRKHQ9Y2W6 561 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 ATG7O95352 703 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 SERPINE1P05121 402 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 FGFR2P21802 821 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 RPL21P46778 160 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TCHHL1Q5QJ38 904 aaPredicted RBP11.81□□□□□ -0.52
LAMA4-201ENST00000230538 TBL1YQ9BQ87 522 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 CROTQ9UKG9 612 aa11.81□□□□□ -0.52
LAMA4-201ENST00000230538 PLD1Q13393 1074 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 FASTKQ14296 549 aaKnown RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SEC23AQ15436 765 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 INAQ16352 499 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 DGKKQ5KSL6 1271 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SYTL5Q8TDW5 730 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms