RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Klhl40Q9D783 621 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Q9D937 123 aaKnown RBP12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Itga2bQ9QUM0 1033 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Adam22Q9R1V6 904 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Spry4Q9WTP2 300 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Crybg1A0A0G2JG52 2065 aa12.68□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 EloblA6PWE0 161 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Zscan5bB2RTN3 468 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Kctd18E0CZ26 429 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Grip2G3XA20 1042 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Zfp408H7BX78 710 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Slc32a1O35633 525 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 ComtO88587 265 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Pabpc1P29341 636 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Sipa1P46062 1037 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Dsc1P55849 886 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Atp5bP56480 529 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 CstaP56567 97 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ezh1P70351 747 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Eif4ebp2P70445 120 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 HmmrQ00547 794 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Dpcr1Q3TNW5 500 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tstd2Q3U269 495 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Q3UE31 404 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tars2Q3UQ84 723 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ttf2Q5NC05 1138 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Cox14Q8BH51 57 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Cox15Q8BJ03 413 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Heatr3Q8BQM4 679 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Arhgap12Q8C0D4 838 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Slitrk6Q8C110 840 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Fam221bQ8C627 487 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 ClasrpQ8CFC7 668 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Sox30Q8CGW4 782 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Dync1li1Q8R1Q8 523 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Sh3kbp1Q8R550 709 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Oas1dQ8VI95 361 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Arhgef3Q91X46 524 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 AslQ91YI0 464 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mageb16Q9CWV4 363 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Eef1gQ9D8N0 437 aaKnown RBP12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Znrf4Q9DAH2 327 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Dcaf6Q9DC22 876 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Znf394Q9Z1D9 521 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Wdfy4E9Q2M9 3149 aa12.67□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Apol6B7ZC55 329 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Abhd12bG3UZN6 359 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 MttpO08601 894 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 DldO08749 509 aaKnown RBP12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Eef1dP57776 281 aaKnown RBP12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Fam92bQ3V2J0 292 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Syne3Q4FZC9 975 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Olfr121Q5CZY0 321 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Adora2aQ60613 410 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ptpn21Q62136 1176 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Sec23ipQ6NZC7 998 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Gpr156Q6PCP7 798 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Nudcd1Q6PIP5 582 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Wfikkn2Q7TQN3 571 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rimbp2Q80U40 1072 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rhbdf2Q80WQ6 827 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Acad11Q80XL6 779 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Them6Q80ZW2 207 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Haus4Q8BFT2 363 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Parp9Q8CAS9 866 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Fam149aQ8CFV2 787 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Lgi4Q8K1S1 537 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Appl1Q8K3H0 707 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ccdc9Q8VC31 543 aaKnown RBP12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Pcdhga6Q91XY2 932 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Unc45aQ99KD5 944 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Cul2Q9D4H8 745 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Prmt1Q9JIF0 371 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Piwil1Q9JMB7 862 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Magi2Q9WVQ1 1275 aa12.66□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup10A2BIN1 180 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup14A2CEK7 180 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Ttc23lA6H6E9 458 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup19A9C497 187 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup15A9R9W0 180 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup17B5X0G2 180 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup8E9PVW0 235 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup7E9QA79 235 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Nr1i3O35627 358 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Men1O88559 611 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup6P02762 180 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Pdia4P08003 638 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup1P11588 180 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Mup2P11589 180 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rb1P13405 921 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Kif4P33174 1231 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Usp25P57080 1055 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rps24P62849 133 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Cd80Q00609 306 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Dzip1lQ499E4 774 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Rtl3Q6P1Y1 553 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Dhx40Q6PE54 779 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Tlr13Q6R5N8 991 aa12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 SyncripQ7TMK9 623 aaKnown RBP12.65□□□□□ -0.38
Ccdc28b-202ENSMUST00000106035 Best2Q8BGM5 508 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms