RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Nlrc4Q3UP24 1024 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Mbtd1Q6P5G3 631 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Dcaf15Q6PFH3 600 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Sort1Q6PHU5 825 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Clec4b1Q7TS58 209 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Arhgap15Q811M1 481 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Pex19Q8VCI5 299 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ndufa10Q99LC3 355 aaKnown RBP19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Fip1l1Q9D824 581 aaKnown RBP19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 IcmtQ9EQK7 283 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Abcb9Q9JJ59 762 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Bace2Q9JL18 514 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Iigp1Q9QZ85 413 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Dnajc12Q9R022 198 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 TfgQ9Z1A1 397 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Mtm1Q9Z2C5 603 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 4930469K13RikA0A286YDB2 92 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Fibcd1A2AV25 459 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Acp4D3YTS9 425 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Taf4E9QAP7 1042 aaKnown RBP19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ptpn9O35239 593 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 AladP10518 330 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Cxcl9P18340 126 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 HalP35492 657 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Gnl1P36916 607 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Btg3P50615 252 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Caprin2Q05A80 1031 aaKnown RBP19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ddx55Q6ZPL9 600 aaKnown RBP19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Podxl2Q8CAE9 603 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 CarfQ8VHI4 689 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ttc30bQ9CY00 664 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 GOLGA7BQ9D428 167 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 RalbQ9JIW9 206 aa19.57■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Pcdh7A0A0A6YY83 1255 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Hmgxb3G3X9M3 1254 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Hcn3O88705 779 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Slc10a3P21129 473 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Krt26Q3TRJ4 462 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 9930111J21Rik1Q5SVP0 844 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Traf3Q60803 567 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Itih1Q61702 907 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 RetsatQ64FW2 609 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Mrgprb8Q7TN51 330 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ckap2lQ7TS74 745 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Osbpl6Q8BXR9 959 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Gsto2Q8K2Q2 248 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Mul1Q8VCM5 352 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Pglyrp2Q8VCS0 530 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Tpgs1Q99MS8 303 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Mrps17Q9CQE3 120 aaKnown RBP19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Fam136aQ9CR98 138 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 TcimQ9D915 106 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Rbck1Q9WUB0 508 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Tmem115Q9WUH1 350 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Atf6F6VAN0 656 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Abcb1bP06795 1276 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ccna2P51943 422 aaKnown RBP19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Q3U4G0 281 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Spata20Q80YT5 790 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Stk32aQ8BGW6 398 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Olfr784Q8VFZ9 319 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Rsph3bQ9DA80 389 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Abcg8Q9DBM0 673 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Atp13a1Q9EPE9 1200 aaKnown RBP19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Jph2Q9ET78 696 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Tagln3Q9R1Q8 199 aa19.56■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Cdr2lA2A6T1 465 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Gm8444F6XS56 118 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Psma2P49722 234 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Kir3dl1P83555 432 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Trafd1Q3UDK1 580 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 MyrfQ3UR85 1138 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Mthfd1lQ3V3R1 977 aaKnown RBP19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Gcnt3Q5JCT0 437 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Papss1Q60967 624 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Q6GQV0 436 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Sp140Q6NSQ5 534 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ireb2Q811J3 963 aaKnown RBP19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Best2Q8BGM5 508 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Znf385bQ8BXJ8 482 aaKnown RBP19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Prpf39Q8K2Z2 665 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Cys1Q8R4T1 145 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 QpctQ9CYK2 362 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Krt20Q9D312 431 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Prorsd1Q9D820 169 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 UtrnE9Q6R7 3430 aa19.55■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Pramef17A2ASJ1 475 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Zfp990B1AVN5 605 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 EsrraO08580 422 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Cyp2b10P12791 500 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Ccr1P51675 355 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Lypla1P97823 230 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Trappc3lQ4KL14 181 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Tspan18Q80WR1 248 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Cdkn3Q810P3 211 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Thnsl1Q8BH55 747 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Agbl2Q8CDK2 862 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Trim32Q8CH72 655 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Wrnip1Q91XU0 660 aa19.54■□□□□ 0.72
Ccdc50-201ENSMUST00000039443 Prpf19Q99KP6 504 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms