RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 BoraQ8BS90 525 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Lrrc19Q8BZT5 364 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Gpc3Q8CFZ4 579 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Rmnd1Q8CI78 450 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Zcchc14Q8VIG0 956 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Rxfp2Q91ZZ5 737 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Zmat2Q9CPW7 199 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Satl1Q9D5N8 744 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 PolhQ9JJN0 694 aa16.66■□□□□ 0.26
Trim28-201ENSMUST00000005705 Olfr731F8VQB9 326 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Igfbp4P47879 254 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 E330034G19RikQ3UWX6 351 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Fam198aQ3UY90 562 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Marveld2Q3UZP0 555 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Nxpe4Q52KP5 543 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Traf3Q60803 567 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Hif1aQ61221 836 aaKnown RBP16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tfdp2Q64163 446 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Olfr1057Q7TR75 315 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Q810S2 196 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 GsdmcQ99NB5 468 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Q9CQC3 228 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Dis3Q9CSH3 958 aaKnown RBP16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ssu72Q9CY97 194 aaKnown RBP16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Map3k6Q9WTR2 1291 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Rnf19bA2A7Q9 732 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Mroh4G3X8W1 983 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Olfr611K7N609 323 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Olfr612L7N462 323 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 MafgO54790 162 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tac1P41539 130 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ccndbp1Q3TVC7 356 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ankrd6Q69ZU8 712 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ago3Q8CJF9 860 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Pcyox1Q9CQF9 505 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Med7Q9CZB6 233 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Tmod3Q9JHJ0 352 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Med20Q9R0X0 212 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 Sept6Q9R1T4 434 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 ClcnkbQ9WUB6 687 aa16.65■□□□□ 0.26
Trim28-201ENSMUST00000005705 1700024B05RikE9Q6D7 167 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Serpinb9O08797 374 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Magea6O89010 325 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 TktP40142 623 aaKnown RBP16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Fam83hQ148V8 1209 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Ino80dQ66JY2 873 aaKnown RBP16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Fam204aQ8C6C7 236 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Myoz3Q8R4E4 245 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Alas1Q8VC19 642 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Adi1Q99JT9 179 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 EtfbQ9DCW4 255 aaKnown RBP16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Akr1c12Q9JLI0 323 aa16.64■□□□□ 0.26
Trim28-201ENSMUST00000005705 Gm10801F7C7Q0 168 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 2610028H24RikG5E8K1 270 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Cyp2c68K7N6C2 491 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tfap2aP34056 437 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Mrgprx2Q3UG50 352 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Cln3Q61124 438 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Papd5Q68ED3 633 aaKnown RBP16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Scube1Q6NZL8 1018 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 TbcdQ8BYA0 1196 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Map4k3Q99JP0 894 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tbc1d15Q9CXF4 671 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tnfsf13bQ9WU72 309 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tle2Q9WVB2 767 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Zfp946F6VWU8 523 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Efna5O08543 228 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Adam15O88839 864 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ckmt1P30275 418 aaKnown RBP16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ranbp9P69566 653 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 HmgcrQ01237 887 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 Psg28Q4KL66 472 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 UvragQ8K245 698 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 PlvapQ91VC4 438 aa16.64■□□□□ 0.25
Trim28-201ENSMUST00000005705 A630010A05RikA9C473 232 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Olfr67F8VPJ8 320 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 BhmtO35490 407 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 StrnO55106 780 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Dnmt3aO88508 908 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Icam1P13597 537 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Gsta3P30115 221 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 SiaeP70665 541 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Cdk7Q03147 346 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 PepdQ11136 493 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ptpn14Q62130 1189 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Tll1Q62381 1013 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Exoc3l4Q6DIA2 721 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Scaf4Q6PFF0 1209 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Slc25a3Q8VEM8 357 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Ubap2Q91VX2 1132 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Magel2Q9QZ04 1284 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Smok3cA0A087WSF2 504 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Dhtkd1A2ATU0 921 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Pknox1O70477 436 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Arl14Q3SXC5 192 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Foxred2Q3USW5 665 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Mbtd1Q6P5G3 631 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Celf6Q7TN33 460 aaKnown RBP16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Fam181bQ80VF6 417 aa16.63■□□□□ 0.25
Trim28-201ENSMUST00000005705 Panx3Q8CEG0 392 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms