RNA–Protein interactions for RNA: ENST00000641746.1

CASC19-256, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 958 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-256	ENST00000641746	IGSF9B	Q9UPX0	1349 aa		5.74	□□□□□ -1.49
CASC19-256	ENST00000641746	ITPR3	Q14573	2671 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	CACNA1F	O60840	1977 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	IGKV6D-41	A0A0C4DH26	115 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	MATN2	O00339	956 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	RRP8	O43159	456 aa	Known RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	EXTL3	O43909	919 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	RASGRP1	O95267	797 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	CCNE1	P24864	410 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ELAVL4	P26378	380 aa	Known RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	FAM189B	P81408	668 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	LRRC32	Q14392	662 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	C21orf62-AS1	Q17RA5	79 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	SLC9C2	Q5TAH2	1124 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ARHGEF16	Q5VV41	709 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ARMC3	Q5W041	872 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	CTR9	Q6PD62	1173 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	SKAP1	Q86WV1	359 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF227	Q86WZ6	799 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF808	Q8N4W9	903 aa	Predicted RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	RNF169	Q8NCN4	708 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF483	Q8TF39	744 aa	Predicted RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	TBC1D5	Q92609	795 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	DNASE1L2	Q92874	299 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	WBP1	Q96G27	269 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	C1orf159	Q96HA4	380 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	IGSF21	Q96ID5	467 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	CAMK1G	Q96NX5	476 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	IWS1	Q96ST2	819 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	RMDN3	Q96TC7	470 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	CELF4	Q9BZC1	486 aa	Known RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ELAC1	Q9H777	363 aa	Known RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	BRD9	Q9H8M2	597 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	MRPL17	Q9NRX2	175 aa	Known RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	TUBE1	Q9UJT0	475 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF215	Q9UL58	517 aa	Predicted RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	SYNPO2	Q9UMS6	1093 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	GTF2A1L	Q9UNN4	478 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	GINS2	Q9Y248	185 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	HEMK1	Q9Y5R4	338 aa	Predicted RBP	5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	PIAS3	Q9Y6X2	628 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	FRMPD4	Q14CM0	1322 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	CCDC171	Q6TFL3	1326 aa		5.73	□□□□□ -1.49
CASC19-256	ENST00000641746	PRPF3	O43395	683 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	PIP5K1C	O60331	668 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	CDC14B	O60729	498 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ZC3H11A	O75152	810 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	RPS6KA5	O75582	802 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	GLUD1	P00367	558 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ENG	P17813	658 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	KRT4	P19013	534 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	UBA1	P22314	1058 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	PPM1F	P49593	454 aa	Predicted RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	NEK3	P51956	506 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ATXN3	P54252	364 aa	Predicted RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	AK2	P54819	239 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	GFRA1	P56159	465 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	PPFIA1	Q13136	1202 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	TUSC3	Q13454	348 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	HNRNPD	Q14103	355 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	TRIM61	Q5EBN2	209 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	CD276	Q5ZPR3	534 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	KCNV1	Q6PIU1	500 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	TOGARAM2	Q6ZUX3	1019 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	PALB2	Q86YC2	1186 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	THNSL2	Q86YJ6	484 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ULK2	Q8IYT8	1036 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF444	Q8N0Y2	327 aa	Predicted RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	OTUD6B	Q8N6M0	293 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	TMEM145	Q8NBT3	493 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	PPHLN1	Q8NEY8	458 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ITFG1	Q8TB96	612 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	PIGK	Q92643	395 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	OR14A2	Q96R54	314 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	SELENOO	Q9BVL4	669 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	GTPBP2	Q9BX10	602 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	NUSAP1	Q9BXS6	441 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ASPSCR1	Q9BZE9	553 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	CCDC113	Q9H0I3	377 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF768	Q9H5H4	540 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	COL20A1	Q9P218	1284 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	FBXO2	Q9UK22	296 aa	Predicted RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	NOB1	Q9ULX3	412 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	APOBEC2	Q9Y235	224 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	NOC2L	Q9Y3T9	749 aa	Known RBP	5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF532	Q9HCE3	1301 aa		5.72	□□□□□ -1.49
CASC19-256	ENST00000641746	LAMA4	Q16363	1823 aa		5.71	□□□□□ -1.49
CASC19-256	ENST00000641746	SPTAN1	Q13813	2472 aa	Known RBP	5.71	□□□□□ -1.49
CASC19-256	ENST00000641746	ZNF839	A8K0R7	811 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	TEX28	O15482	410 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	PDPK1	O15530	556 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	SUSD5	O60279	629 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	CUTA	O60888	179 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	KATNA1	O75449	491 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	ECI2	O75521	394 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	PRDM1	O75626	825 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	LTF	P02788	710 aa		5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	MYCL	P12524	364 aa	Predicted RBP	5.71	□□□□□ -1.5
CASC19-256	ENST00000641746	PDE6A	P16499	860 aa		5.71	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms