RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 CCDC126Q96EE4 140 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 TRIM54Q9BYV2 358 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 MROH8Q9H579 483 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 ZDHHC18Q9NUE0 388 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 PACSIN3Q9UKS6 424 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 TADA2AO75478 443 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 PTPN20Q4JDL3 420 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 AASDHQ4L235 1098 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 EEF1DP3Q658K8 133 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 MIB1Q86YT6 1006 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 ZDHHC17Q8IUH5 632 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 DDI1Q8WTU0 396 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 CDT1Q9H211 546 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 VAPBO95292 243 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 PSMA4P25789 261 aaKnown RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 CDH17Q12864 832 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 PARP6Q2NL67 630 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 ZBTB49Q6ZSB9 765 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 CLNKQ7Z7G1 428 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 SNRNP27Q8WVK2 155 aaKnown RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 VPS50Q96JG6 964 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 APBA2Q99767 749 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 NMRAL1Q9HBL8 299 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 TBC1D23Q9NUY8 699 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 RBM22Q9NW64 420 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 PRG3Q9Y2Y8 225 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 UMODL1Q5DID0 1318 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 PHGDHO43175 533 aaKnown RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 CCDC130P13994 396 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 SGO1Q5FBB7 561 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 GNASQ5JWF2 1037 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 ALYREFQ86V81 257 aaKnown RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 LENG9Q96B70 501 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 RPRD1AQ96P16 312 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 ATXN3LQ9H3M9 355 aa17.07■□□□□ 0.32
SCARB2-210ENST00000638567 MRPL42Q9Y6G3 142 aaKnown RBP17.07■□□□□ 0.32
SCARB2-210ENST00000638567 UBDO15205 165 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 NCAM2O15394 837 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 ZMPSTE24O75844 475 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 TWF1Q12792 350 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 LAMB3Q13751 1172 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 GCNAQ96QF7 691 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 CPNE1Q99829 537 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 RHBDL2Q9NX52 303 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 C16orf96A6NNT2 1141 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 ALBP02768 609 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 GJB1P08034 283 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 PKNOX1P55347 436 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 DCAF12L1Q5VU92 463 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 MRNIPQ6NTE8 343 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 MON1BQ7L1V2 547 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 ZNF555Q8NEP9 628 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 MBOAT7Q96N66 472 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 SEPT5Q99719 369 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-210ENST00000638567 ACO2Q99798 780 aaKnown RBP17.06■□□□□ 0.32
SCARB2-210ENST00000638567 LRMDAQ9H2I8 198 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 ARL8BQ9NVJ2 186 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 COL20A1Q9P218 1284 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 MCM8Q9UJA3 840 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 MROH7Q68CQ1 1323 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 B4GALT5O43286 388 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 MPOP05164 745 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 HADHBP55084 474 aaKnown RBP17.06■□□□□ 0.32
SCARB2-210ENST00000638567 RIC8BQ9NVN3 520 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 TMEM59LQ9UK28 342 aa17.06■□□□□ 0.32
SCARB2-210ENST00000638567 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 A0A0A0MRY4 1105 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 FBXO21O94952 628 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 PIGNO95427 931 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 ATP4AP20648 1035 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 PSMB4P28070 264 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 NAGLUP54802 743 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 RIPOR1Q6ZS17 1223 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 C12orf50Q8NA57 414 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 COPS5Q92905 334 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 SPATA13Q96N96 652 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 PKP3Q9Y446 797 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 MAGEB16A2A368 324 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 NR5A2O00482 541 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 TBC1D12O60347 775 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 HIRAP54198 1017 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 MRPS22P82650 360 aaKnown RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 SPIRE1Q08AE8 756 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 TAF1CQ15572 869 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 MGAT5BQ3V5L5 792 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 SPANXN3Q5MJ09 141 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 C10orf120Q5SQS8 335 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 SZRD1Q7Z422 152 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 PTAR1Q7Z6K3 402 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 DEFB132Q7Z7B7 95 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 ZNF512Q96ME7 567 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 SIKE1Q9BRV8 207 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 ZCWPW1Q9H0M4 648 aa17.05■□□□□ 0.32
SCARB2-210ENST00000638567 DDX43Q9NXZ2 648 aaKnown RBP17.05■□□□□ 0.32
SCARB2-210ENST00000638567 SNUPNO95149 360 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms