RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 RCOR3Q9P2K3 495 aaPredicted RBP19.86■□□□□ 0.77
TUBB4B-202ENST00000604929 MAGED2Q9UNF1 606 aaPredicted RBP19.86■□□□□ 0.77
TUBB4B-202ENST00000604929 TBX18O95935 607 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 SRGAP2BP0DMP2 458 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 NR2C2P49116 596 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 AIF1P55008 147 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 SCAPQ12770 1279 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 TAF10Q12962 218 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 SKIDA1Q1XH10 827 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 HP1BP3Q5SSJ5 553 aaPredicted RBP19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 RNASEH2BQ5TBB1 312 aaKnown RBP19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 BEND5Q7L4P6 421 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 TP53INP2Q8IXH6 220 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 FBXO32Q969P5 355 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 YME1L1Q96TA2 773 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 CLSTN3Q9BQT9 956 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 MTRRQ9UBK8 725 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 IRAK2O43187 625 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 IGLV3-25P01717 112 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 ERCC2P18074 760 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 TPI1P60174 286 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 BASP1P80723 227 aaKnown RBP19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 GAD2Q05329 585 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 ZNF844Q08AG5 666 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 SLC8B1Q6J4K2 584 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 RNF168Q8IYW5 571 aaPredicted RBP19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 LGMNQ99538 433 aa19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 CDC42EP4Q9H3Q1 356 aaKnown RBP19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 RC3H2Q9HBD1 1191 aaKnown RBP19.85■□□□□ 0.77
TUBB4B-202ENST00000604929 COL4A6Q14031 1691 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 TCRBV7S3A2A0A539 114 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 BCLAF3A2AJT9 711 aaKnown RBP19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 MFSD11O43934 449 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 ACSL3O95573 720 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 DNAJB2P25686 324 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 IFFO1Q0D2I5 559 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 SMARCB1Q12824 385 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 MTM1Q13496 603 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 EIF4EBP2Q13542 120 aaPredicted RBP19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 DPYSQ14117 519 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 KYNUQ16719 465 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 TTMPQ5BVD1 217 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 RASIP1Q5U651 963 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 ANKRD22Q5VYY1 191 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 DENND2CQ68D51 928 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 SLC39A11Q8N1S5 342 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 AUTS2Q8WXX7 1259 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 CPT1BQ92523 772 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 RBM15Q96T37 977 aaKnown RBP eCLIP19.84■□□□□ 0.779e-11■■■■■ 30.1
TUBB4B-202ENST00000604929 PATJQ8NI35 1801 aa19.84■□□□□ 0.77
TUBB4B-202ENST00000604929 RIPK2O43353 540 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 MOCS2O96007 188 aaPredicted RBP19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 SOD2P04179 222 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 ATF6P18850 670 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 ACTN2P35609 894 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 SEMA3BQ13214 749 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 MORF4L2Q15014 288 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 ZCCHC9Q8N567 271 aaKnown RBP19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 CCDC110Q8TBZ0 833 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 SMOC2Q9H3U7 446 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 IL37Q9NZH6 218 aa19.83■□□□□ 0.77
TUBB4B-202ENST00000604929 LRIG2O94898 1065 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 EPHB2P29323 1055 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 CCR1P32246 355 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 EFEMP1Q12805 493 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 SLC45A4Q5BKX6 768 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 LRIG3Q6UXM1 1119 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 COLGALT1Q8NBJ5 622 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 CCNYQ8ND76 341 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 C9orf72Q96LT7 481 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 OXCT2Q9BYC2 517 aaPredicted RBP19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 IL23AQ9NPF7 189 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 XPO7Q9UIA9 1087 aaKnown RBP19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 FARP1Q9Y4F1 1045 aaPredicted RBP19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 BACE2Q9Y5Z0 518 aa19.83■□□□□ 0.76
TUBB4B-202ENST00000604929 LAMA3Q16787 3333 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 DCLK1O15075 740 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 RTN3O95197 1032 aaPredicted RBP19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 RPL10AP62906 217 aaKnown RBP19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 AP1B1Q10567 949 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 FAXCQ5TGI0 409 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 PCGF5Q86SE9 256 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 PPIL6Q8IXY8 311 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 PRCCQ92733 491 aaPredicted RBP19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 BADQ92934 168 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 SPATA17Q96L03 361 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 TSPYL1Q9H0U9 437 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 ARHGEF38Q9NXL2 777 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 SPG21Q9NZD8 308 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 BCCIPQ9P287 314 aaKnown RBP eCLIP19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 MYO16Q9Y6X6 1858 aa19.82■□□□□ 0.76
TUBB4B-202ENST00000604929 EFCAB14O75071 495 aa19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 PAGE1O75459 146 aa19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 SEC24AO95486 1093 aa19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 XRCC4Q13426 336 aa19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 SPDYCQ5MJ68 293 aa19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 RWDD4Q6NW29 188 aaKnown RBP19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 MIB1Q86YT6 1006 aa19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 CDKL3Q8IVW4 592 aaPredicted RBP19.81■□□□□ 0.76
TUBB4B-202ENST00000604929 SH2D3CQ8N5H7 860 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms