RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CWC15Q9P013 229 aaKnown RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 UXTQ9UBK9 157 aaPredicted RBP12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ASIC3Q9UHC3 531 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ASB3Q9Y575 518 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SLC4A7Q9Y6M7 1214 aa12.73□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NUP205Q92621 2012 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 A0A1W2PQH9 124 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 KCNU1A8MYU2 1149 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 C5orf67F2Z3F1 127 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 EEF2KO00418 725 aaKnown RBP12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DCLK1O15075 740 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PPFIA2O75334 1257 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 IGLV3-27P01718 113 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RBP3P10745 1247 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ATF6P18850 670 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SERPINB6P35237 376 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ATXN1P54253 815 aaKnown RBP12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MMRN1Q13201 1228 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 VEPH1Q14D04 833 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MORF4L2Q15014 288 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TRIP4Q15650 581 aaPredicted RBP12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 P3H1Q32P28 736 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NCBP2-AS2Q69YL0 99 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RHBDF2Q6PJF5 856 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZDHHC24Q6UX98 284 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 GSTA5Q7RTV2 222 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 HOOK3Q86VS8 718 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 C7orf61Q8IZ16 206 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 EDEM1Q92611 657 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 OLFM3Q96PB7 478 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DPH5Q9H2P9 285 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CRISPLD1Q9H336 500 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 NMUR1Q9HB89 426 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 GPATCH2LQ9NWQ4 482 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 GMIPQ9P107 970 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SHOC2Q9UQ13 582 aa12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 HBS1LQ9Y450 684 aaKnown RBP12.72□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SGK1O00141 431 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PPP1R12AO14974 1030 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ADAM12O43184 909 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MTSS1O43312 755 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RB1P06400 928 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PECAM1P16284 738 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 GOT1P17174 413 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PFKLP17858 780 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TNNT3P45378 269 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ALDH1A3P47895 512 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 GPR15P49685 360 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RABGGTBP53611 331 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ARPP19P56211 112 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TPI1P60174 286 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 USP46P62068 366 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MRPS25P82663 173 aaKnown RBP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TAF10Q12962 218 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 PDK1Q15118 436 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SLC45A4Q5BKX6 768 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 CFAP58Q5T655 872 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MANEALQ5VSG8 457 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TMC3Q7Z5M5 1100 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ITIH5Q86UX2 942 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 LZTR1Q8N653 840 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TTC9BQ8N6N2 239 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 STKLD1Q8NE28 680 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FBXO25Q8TCJ0 367 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 QKIQ96PU8 341 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 FRMD8Q9BZ67 464 aaPredicted RBP12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TXLNGYQ9BZA5 131 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 TKTL2Q9H0I9 626 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 MED4Q9NPJ6 270 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 HPCAL4Q9UM19 191 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 SNX24Q9Y343 169 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 YIPF1Q9Y548 306 aa12.71□□□□□ -0.37
NEDD8-MDP1-203ENST00000604306 ATG2AQ2TAZ0 1938 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 WASH4PA8MWX3 477 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 APOEP02649 317 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ADH1AP07327 375 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 RARGP13631 454 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MX2P20592 715 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ELF1P32519 619 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ACTN2P35609 894 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 BMPR1AP36894 532 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ADCY8P40145 1251 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 DYNLT1P63172 113 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LLGL1Q15334 1064 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NUGGCQ68CJ6 796 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 HIBCHQ6NVY1 386 aaPredicted RBP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 FAM117BQ6P1L5 589 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LRIG3Q6UXM1 1119 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CCDC149Q6ZUS6 474 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CROCCP2Q86T23 111 aa12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 DDX42Q86XP3 938 aaKnown RBP eCLIP12.7□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LRRC49Q8IUZ0 686 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms