RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 SCD5Q86SK9 330 aa14.39□□□□□ -0.11
IRF3-225ENST00000600022 MINDY1Q8N5J2 469 aa14.39□□□□□ -0.11
IRF3-225ENST00000600022 TNIP3Q96KP6 325 aa14.39□□□□□ -0.11
IRF3-225ENST00000600022 MRGPRX1Q96LB2 322 aa14.39□□□□□ -0.11
IRF3-225ENST00000600022 HSPA12BQ96MM6 686 aa14.39□□□□□ -0.11
IRF3-225ENST00000600022 NUP58Q9BVL2 599 aa14.39□□□□□ -0.11
IRF3-225ENST00000600022 APOBEC3GQ9HC16 384 aaKnown RBP14.39□□□□□ -0.11
IRF3-225ENST00000600022 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.39□□□□□ -0.117e-6■■■■■ 33.3
IRF3-225ENST00000600022 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.39□□□□□ -0.11
IRF3-225ENST00000600022 PCDH15Q96QU1 1955 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 ARHGAP33O14559 1287 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 SH3BP5O60239 455 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 CACNG3O60359 315 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 ACO1P21399 889 aaKnown RBP14.38□□□□□ -0.11
IRF3-225ENST00000600022 ATP5C1P36542 298 aaKnown RBP14.38□□□□□ -0.11
IRF3-225ENST00000600022 BYSLQ13895 437 aaKnown RBP14.38□□□□□ -0.11
IRF3-225ENST00000600022 COL9A2Q14055 689 aaPredicted RBP14.38□□□□□ -0.11
IRF3-225ENST00000600022 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 ZACNQ401N2 412 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 LRRC8AQ8IWT6 810 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 PNPLA1Q8N8W4 532 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 KCNV2Q8TDN2 545 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 SLC35C1Q96A29 364 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 GABRG3Q99928 467 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 NDST4Q9H3R1 872 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 SLC32A1Q9H598 525 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 CYLDQ9NQC7 956 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 COMMD8Q9NX08 183 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 CLEC4EQ9ULY5 219 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 SCML2Q9UQR0 700 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 PLXND1Q9Y4D7 1925 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 ATP8B3O60423 1300 aa14.38□□□□□ -0.11
IRF3-225ENST00000600022 ANKRD11Q6UB99 2663 aaPredicted RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 AKR1B15C9JRZ8 316 aaPredicted RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 TEX33O43247 280 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 ASS1P00966 412 aaKnown RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 HLA-DRAP01903 254 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 CAPNS1P04632 268 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 RARGP13631 454 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 KRT13P13646 458 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 ATXN3P54252 364 aaPredicted RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 RING1Q06587 406 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 SLC36A4Q6YBV0 504 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 Q6ZNB5 142 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 ZNF397Q8NF99 534 aaPredicted RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 ZCCHC14Q8WYQ9 949 aaKnown RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 CYFIP2Q96F07 1278 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 ZNF419Q96HQ0 510 aaPredicted RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 ERGIC2Q96RQ1 377 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 TLR8Q9NR97 1041 aaKnown RBP14.37□□□□□ -0.11
IRF3-225ENST00000600022 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.37□□□□□ -0.11
IRF3-225ENST00000600022 MARK1Q9P0L2 795 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 MSRB2Q9Y3D2 182 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 NEUROG3Q9Y4Z2 214 aa14.37□□□□□ -0.11
IRF3-225ENST00000600022 UPK3BL1B0FP48 263 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 UPK3BL2E5RIL1 263 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 OPHN1O60890 802 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 GJB3O75712 270 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 STC2O76061 302 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 HMBSP08397 361 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 FAM200BP0CF97 657 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 TRIM21P19474 475 aaKnown RBP14.36□□□□□ -0.11
IRF3-225ENST00000600022 DGKGP49619 791 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 PPP3CAQ08209 521 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 GEN1Q17RS7 908 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 FUT11Q495W5 492 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
IRF3-225ENST00000600022 C10orf120Q5SQS8 335 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 TRMT11Q7Z4G4 463 aaKnown RBP14.36□□□□□ -0.11
IRF3-225ENST00000600022 RGL4Q8IZJ4 473 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 HDDC3Q8N4P3 179 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 CEP76Q8TAP6 659 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 TMC2Q8TDI7 906 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 XPO6Q96QU8 1125 aaKnown RBP14.36□□□□□ -0.11
IRF3-225ENST00000600022 HNRNPABQ99729 332 aaKnown RBP14.36□□□□□ -0.11
IRF3-225ENST00000600022 MKRN2Q9H000 416 aaKnown RBP14.36□□□□□ -0.11
IRF3-225ENST00000600022 FBXO44Q9H4M3 255 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 IL21RQ9HBE5 538 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 WDR35Q9P2L0 1181 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 FBXO10Q9UK96 956 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 SLCO1B1Q9Y6L6 691 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 STON1Q9Y6Q2 735 aa14.36□□□□□ -0.11
IRF3-225ENST00000600022 GTPBP10A4D1E9 387 aaKnown RBP14.35□□□□□ -0.11
IRF3-225ENST00000600022 AFPP02771 609 aaKnown RBP14.35□□□□□ -0.11
IRF3-225ENST00000600022 TRIM49P0CI25 452 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 TRIM49CP0CI26 452 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 SKILP12757 684 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 CD58P19256 250 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 HOXD12P35452 270 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 GCLMP48507 274 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 VAMP7P51809 220 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 KIF11P52732 1056 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 AP3M2P53677 418 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 TBX2Q13207 712 aaPredicted RBP14.35□□□□□ -0.11
IRF3-225ENST00000600022 PLEKHG6Q3KR16 790 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 PPP1R26Q5T8A7 1209 aaPredicted RBP14.35□□□□□ -0.11
IRF3-225ENST00000600022 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 SDE2Q6IQ49 451 aa14.35□□□□□ -0.11
IRF3-225ENST00000600022 KIAA1324Q6UXG2 1013 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms