RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 WASHC2DQ5SRD0 308 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 SLC26A11Q86WA9 606 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PALB2Q86YC2 1186 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 LRRC40Q9H9A6 602 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 RXFP1Q9HBX9 757 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 TSPAN16Q9UKR8 245 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 SPACA6W5XKT8 324 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 VIRMAQ69YN4 1812 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PLA2G6O60733 806 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 CPA2P48052 419 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 FBXO36Q8NEA4 188 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 OTULINQ96BN8 352 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 TUBGCP3Q96CW5 907 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 VPS50Q96JG6 964 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 FMN2Q9NZ56 1722 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 AKAP3O75969 853 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 ELNP15502 786 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PEX5P50542 639 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 ANXA11P50995 505 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 CRYBB1P53674 252 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PHKG1Q16816 387 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 TREML2Q5T2D2 321 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 LUZP2Q86TE4 346 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 NDEL1Q9GZM8 345 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PDGFCQ9NRA1 345 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 SYBUQ9NX95 663 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PRDM4Q9UKN5 801 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 SAC3D1A6NKF1 404 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 CRTAMO95727 393 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PSMA3P25788 255 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 SLC20A2Q08357 652 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 MAP4K3Q8IVH8 894 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 RXFP2Q8WXD0 754 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 RMND5AQ9H871 391 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 STMN3Q9NZ72 180 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 MRPS23Q9Y3D9 190 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 WTIPA6NIX2 430 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 NCAM2O15394 837 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 TOMM70O94826 608 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 MLH1P40692 756 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 CHRNB3Q05901 458 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 ITGA7Q13683 1181 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 MED1Q15648 1581 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 SPDYCQ5MJ68 293 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 PPP4R4Q6NUP7 873 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 PHACTR4Q8IZ21 702 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 FAM118BQ9BPY3 351 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 SIKE1Q9BRV8 207 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 CDC42EP4Q9H3Q1 356 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 SFMBT1Q9UHJ3 866 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 DRG1Q9Y295 367 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 RPS6KL1Q9Y6S9 549 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 PROSCO94903 275 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 PLEKP08567 350 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 HPCAP84074 193 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 TATDN1Q6P1N9 297 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 FUCA2Q9BTY2 467 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 ASAH2Q9NR71 780 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 IMPAD1Q9NX62 359 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 RAMP2O60895 175 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 DGKIO75912 1065 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 BLVRAP53004 296 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 YWHAZP63104 245 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 SEL1L3Q68CR1 1132 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 ZNF786Q8N393 782 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 ATXN2LQ8WWM7 1075 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 CD248Q9HCU0 757 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 NMRK2Q9NPI5 230 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 HAO1Q9UJM8 370 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 RAB23Q9ULC3 237 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 TNFSF13BQ9Y275 285 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 RBP1P09455 135 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 PAEPP09466 180 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 PTPN7P35236 360 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 EDEM1Q92611 657 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 HES6Q96HZ4 224 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 PAFAH2Q99487 392 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 SH3GL1Q99961 368 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 KLHL4Q9C0H6 718 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 RAB21Q9UL25 225 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 TSC22D4Q9Y3Q8 395 aa13.65□□□□□ -0.22
SMARCA4-216ENST00000591545 SPATA31C2B4DYI2 1134 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 PDE5AO76074 875 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 MZF1P28698 734 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 NDUFV1P49821 464 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 PRKAA2P54646 552 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 PTENP60484 403 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 ADIGQ0VDE8 80 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 TMEM119Q4V9L6 283 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 SEMA6BQ9H3T3 888 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 ATP13A1Q9HD20 1204 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 CTNNAL1Q9UBT7 734 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 LNPEPQ9UIQ6 1025 aa13.64□□□□□ -0.23
SMARCA4-216ENST00000591545 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms