RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TAB3Q8N5C8 712 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 GIMAP7Q8NHV1 300 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 TCP10LQ8TDR4 215 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 HSFY1Q96LI6 401 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 CDK15Q96Q40 435 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PEBP4Q96S96 227 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 KIF9Q9HAQ2 790 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 USP29Q9HBJ7 922 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PCDH18Q9HCL0 1135 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 CD248Q9HCU0 757 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SAR1AQ9NR31 198 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 FOXD3Q9UJU5 478 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 LRRC37A2A6NM11 1700 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 DICER1Q9UPY3 1922 aaKnown RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SERTM1A2A2V5 107 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 HACD1B0YJ81 288 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 KBTBD13C9JR72 458 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 I3L4J1 428 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PIK3R2O00459 728 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 C2CD2LO14523 706 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 COPEO14579 308 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 HUS1O60921 280 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 BANF1O75531 89 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 GCATO75600 419 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 TGDSO95455 350 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 MMP3P08254 477 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 CNTFP26441 200 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 RBL1P28749 1068 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 NOS2P35228 1153 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 MAP2K2P36507 400 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 MAGEA6P43360 314 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SERPINB9P50453 376 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 DPYSL2Q16555 572 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PREPLQ4J6C6 727 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 PKDCCQ504Y2 493 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 GJC2Q5T442 439 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 WLSQ5T9L3 541 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 ATG16L1Q676U5 607 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 HEATR6Q6AI08 1181 aaKnown RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 NPNTQ6UXI9 565 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 ASRGL1Q7L266 308 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SLC26A9Q7LBE3 791 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 CHSY1Q86X52 802 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 CCNJLQ8IV13 435 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 CRYBG2Q8N1P7 616 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 APPL2Q8NEU8 664 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 ERP27Q96DN0 273 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 APOPT1Q96IL0 206 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SNX27Q96L92 541 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 RMDN2Q96LZ7 410 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 TMEM237Q96Q45 408 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 TSSK1BQ9BXA7 367 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 DHX35Q9H5Z1 703 aaKnown RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 NRDE2Q9H7Z3 1164 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 ETNK2Q9NVF9 386 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SNTG2Q9NY99 539 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 RCOR3Q9P2K3 495 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 STK38LQ9Y2H1 464 aa7.66□□□□□ -1.18
ZNF540-206ENST00000589117 MTO1Q9Y2Z2 717 aaKnown RBP7.66□□□□□ -1.18
ZNF540-206ENST00000589117 SMIM35A0A1B0GVV1 85 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 TCRBV7S3A2A0A539 114 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 IQCA1LA6NCM1 817 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 KPNA7A9QM74 516 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 PFKMP08237 780 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 HOXD8P13378 290 aaPredicted RBP7.65□□□□□ -1.18
ZNF540-206ENST00000589117 CYP2F1P24903 491 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 FDFT1P37268 417 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 PSMC4P43686 418 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 ZBTB16Q05516 673 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 SLC18A2Q05940 514 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 ZBTB6Q15916 424 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 SV2CQ496J9 727 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 ANKRD20A3Q5VUR7 823 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 C9orf57Q5W0N0 161 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 PDZD4Q76G19 769 aaPredicted RBP7.65□□□□□ -1.18
ZNF540-206ENST00000589117 STRADAQ7RTN6 431 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 OTOAQ7RTW8 1153 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 TTC30AQ86WT1 665 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 TREML1Q86YW5 311 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 CCDC116Q8IYX3 515 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 PCDH19Q8TAB3 1148 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 CDKL2Q92772 493 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 ATP2A3Q93084 1043 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 CFAP36Q96G28 342 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 MRPL45Q9BRJ2 306 aaKnown RBP7.65□□□□□ -1.18
ZNF540-206ENST00000589117 NAT9Q9BTE0 207 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 SNRNP25Q9BV90 132 aaKnown RBP7.65□□□□□ -1.18
ZNF540-206ENST00000589117 MYLK2Q9H1R3 596 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 SPON1Q9HCB6 807 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 SLCO1B3Q9NPD5 702 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 FAM49BQ9NUQ9 324 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 GDAP2Q9NXN4 497 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.65□□□□□ -1.18
ZNF540-206ENST00000589117 NOP53Q9NZM5 478 aaKnown RBP7.65□□□□□ -1.18
ZNF540-206ENST00000589117 CNTN3Q9P232 1028 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 MORF4L1Q9UBU8 362 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 ZFP69BQ9UJL9 534 aa7.65□□□□□ -1.18
ZNF540-206ENST00000589117 VGLL3A8MV65 326 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 GOLGA8RI6L899 631 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 PAPSS1O43252 624 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms