RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ATP6V1C1P21283 382 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 CYP2F1P24903 491 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 ADRA1DP25100 572 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 PTDSS1P48651 473 aaKnown RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 SLC11A2P49281 568 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 MIER2Q8N344 545 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 ETNPPLQ8TBG4 499 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 SLC7A5P2Q9GIP4 190 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 COPS7BQ9H9Q2 264 aaPredicted RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 CISHQ9NSE2 258 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 ABLIM1O14639 778 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 ANXA6P08133 673 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 SSTR1P30872 391 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 BFSP2Q13515 415 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 TYW3Q6IPR3 259 aaKnown RBP13.37□□□□□ -0.27
RNF43-208ENST00000584437 ZNF544Q6NX49 715 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 CHMP1BQ7LBR1 199 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 CDH24Q86UP0 819 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 DPP10Q8N608 796 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 ACTRT2Q8TDY3 377 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 FIG4Q92562 907 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 RERGLQ9H628 205 aa13.37□□□□□ -0.27
RNF43-208ENST00000584437 A0A096LPK6 155 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 ODC1P11926 461 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 CCDC130P13994 396 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 ITGALP20701 1170 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 GPC1P35052 558 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 ALDH1A3P47895 512 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 NR2C2P49116 596 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 ZNF177Q13360 481 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 FRG1Q14331 258 aaKnown RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 GLB1LQ6UWU2 654 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 IKBIPQ70UQ0 350 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 WDR36Q8NI36 951 aaKnown RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 UTP15Q8TED0 518 aaKnown RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 SEPT5Q99719 369 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 ELOVL6Q9H5J4 265 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 AP1G2O75843 785 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 JCHAINP01591 159 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 GCNT1Q02742 428 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 PTPN11Q06124 597 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 RRP1BQ14684 758 aaKnown RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 SEC23AQ15436 765 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 SV2AQ7L0J3 742 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 TMEM176AQ96HP8 235 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 RNF145Q96MT1 663 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 PDGFCQ9NRA1 345 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 RRN3Q9NYV6 651 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 GGA3Q9NZ52 723 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 CPSF4O95639 269 aaKnown RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 HOXB8P17481 243 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 FAAP100Q0VG06 881 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 C11orf74Q86VG3 221 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 DUSP9Q99956 384 aaKnown RBP13.36□□□□□ -0.27
RNF43-208ENST00000584437 NMRAL1Q9HBL8 299 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 DDX3XO00571 662 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■□□□□ 10
RNF43-208ENST00000584437 HS6ST1O60243 411 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 CYP2C9P11712 490 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 TRPC4APQ8TEL6 797 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 UBXN6Q9BZV1 441 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 EHD4Q9H223 541 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 NMRK2Q9NPI5 230 aa13.36□□□□□ -0.27
RNF43-208ENST00000584437 CCDC154A6NI56 674 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 ICAM1P05362 532 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 TSHRP16473 764 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 HK2P52789 917 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 MGAT5BQ3V5L5 792 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 ACOT1Q86TX2 421 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 C8orf59Q8N0T1 100 aaPredicted RBP13.35□□□□□ -0.27
RNF43-208ENST00000584437 TSPAN14Q8NG11 270 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 TBC1D10AQ9BXI6 508 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 DNAJC18Q9H819 358 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 ACO1P21399 889 aaKnown RBP13.35□□□□□ -0.27
RNF43-208ENST00000584437 CCNG1P51959 295 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 ACAP1Q15027 740 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 KLHL12Q53G59 568 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 TDRD10Q5VZ19 366 aaKnown RBP13.35□□□□□ -0.27
RNF43-208ENST00000584437 CASP12Q6UXS9 341 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 BRINP3Q76B58 766 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 KCNMB4Q86W47 210 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 PYDC1Q8WXC3 89 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 MBD2Q9UBB5 411 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 TRHDEQ9UKU6 1024 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 BTBD3Q9Y2F9 522 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 H7C0S8 307 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 WFS1O76024 890 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 DDR1Q08345 913 aa13.35□□□□□ -0.27
RNF43-208ENST00000584437 PDK3Q15120 406 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms