RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 CEP295NLQ96MC4 621 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 CYP2S1Q96SQ9 504 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 TTLL2Q9BWV7 592 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 TTYH3Q9C0H2 523 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 FBXO44Q9H4M3 255 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 CYTH4Q9UIA0 394 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 NOCTQ9UK39 431 aaKnown RBP13.93□□□□□ -0.18
CCDC40-205ENST00000571028 MMP17Q9ULZ9 603 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
CCDC40-205ENST00000571028 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 ITPR1Q14643 2758 aa13.93□□□□□ -0.18
CCDC40-205ENST00000571028 ATXN2Q99700 1313 aaKnown RBP13.92□□□□□ -0.18
CCDC40-205ENST00000571028 TRAV19A0A0A6YYK7 116 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 A0A1W2PQH9 124 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 C2orf78A6NCI8 922 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 UPK3BL1B0FP48 263 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 UPK3BL2E5RIL1 263 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 GABBR2O75899 941 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 GYPCP04921 128 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 CCDC172P0C7W6 258 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 TNFAIP3P21580 790 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 PLA2G4AP47712 749 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 PGFP49763 221 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 ZBED6P86452 979 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 CDR2Q01850 454 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 KLHL30Q0D2K2 578 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 CRY1Q16526 586 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 TDRD12Q587J7 1177 aaKnown RBP13.92□□□□□ -0.18
CCDC40-205ENST00000571028 FIGNQ5HY92 759 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 NAA35Q5VZE5 725 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-205ENST00000571028 PIP4P1Q86T03 277 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 PGBD3Q8N328 593 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 WDTC1Q8N5D0 677 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 ARL14EPQ8N8R7 260 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-205ENST00000571028 TMEM35BQ8NCS4 154 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 RLN3Q8WXF3 142 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 CPA5Q8WXQ8 436 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 EZH1Q92800 747 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-205ENST00000571028 AGPAT1Q99943 283 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 EDEM3Q9BZQ6 932 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 UBXN6Q9BZV1 441 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 NACA2Q9H009 215 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 CCDC86Q9H6F5 360 aaKnown RBP13.92□□□□□ -0.18
CCDC40-205ENST00000571028 SYNCQ9H7C4 482 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 PNPLA8Q9NP80 782 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 POLMQ9NP87 494 aaPredicted RBP13.92□□□□□ -0.18
CCDC40-205ENST00000571028 TJP2Q9UDY2 1190 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 NAGPAQ9UK23 515 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 NUDT5Q9UKK9 219 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 PCDHGC3Q9UN70 934 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 PCDHB9Q9Y5E1 797 aa13.92□□□□□ -0.18
CCDC40-205ENST00000571028 ITIH6Q6UXX5 1313 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 GCN1Q92616 2671 aaKnown RBP13.91□□□□□ -0.18
CCDC40-205ENST00000571028 KIF26AQ9ULI4 1882 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-205ENST00000571028 A0A1W2PQJ5 194 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 ZNF840PA6NDX5 716 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 ZIC2O95409 532 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-205ENST00000571028 NFATC1O95644 943 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 ZBED1O96006 694 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 CHRNB2P17787 502 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 HOXD12P35452 270 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 PTGER3P43115 390 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 ADKP55263 362 aaKnown RBP13.91□□□□□ -0.18
CCDC40-205ENST00000571028 FMO1Q01740 532 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 RAB41Q5JT25 222 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 OR6B2Q6IFH4 312 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 IRF2BP2Q7Z5L9 587 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 RABEPKQ7Z6M1 372 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 PHLDB2Q86SQ0 1253 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 SCUBE3Q8IX30 993 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 PDZD8Q8NEN9 1154 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 CEP76Q8TAP6 659 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 CLEC4CQ8WTT0 213 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 NOX5Q96PH1 765 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 PCDHB18PQ96TA0 734 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC40-205ENST00000571028 HAUS4Q9H6D7 363 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 NMUR1Q9HB89 426 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 TLR8Q9NR97 1041 aaKnown RBP13.91□□□□□ -0.18
CCDC40-205ENST00000571028 TMEM74BQ9NUR3 256 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 COMMD8Q9NX08 183 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 SLC6A14Q9UN76 642 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 SCML2Q9UQR0 700 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 PTPRDP23468 1912 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 EML5Q05BV3 1969 aa13.91□□□□□ -0.18
CCDC40-205ENST00000571028 FAM221BA6H8Z2 402 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 E5RJQ4 531 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 ADCY5O95622 1261 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 HDCP19113 662 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 P2RY2P41231 377 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 ACADSBP45954 432 aa13.9□□□□□ -0.18
CCDC40-205ENST00000571028 PDCLQ13371 301 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms