RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CCNT1O60563 726 aaKnown RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 COBLO75128 1261 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 ALDH1A2O94788 518 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 MATN4O95460 622 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 CYP3A4P08684 503 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 OR52Z1P0C646 297 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 PFKFB1P16118 471 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 HDCP19113 662 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 CYP3A7P24462 503 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 YY1P25490 414 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 KLRC1P26715 233 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 MARCKSP29966 332 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 HOXA7P31268 230 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 ELF1P32519 619 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 MCM7P33993 719 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 SYKP43405 635 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 HMGCS2P54868 508 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 POLE2P56282 527 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 MXRA7P84157 204 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 SETQ01105 290 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 RAB30Q15771 203 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 LETM2Q2VYF4 491 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 USH1GQ495M9 461 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 EARS2Q5JPH6 523 aaKnown RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 KIAA1755Q5JYT7 1200 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 FAM180BQ6P0A1 224 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 RBM43Q6ZSC3 357 aaKnown RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 LRRTM4Q86VH4 590 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 ENGASEQ8NFI3 743 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 HDAC2Q92769 488 aaKnown RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 C1orf43Q9BWL3 253 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 TEX13BQ9BXU2 312 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 KRTAP9-9Q9BYP9 154 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 C11orf54Q9H0W9 315 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 CUEDC2Q9H467 287 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 A1CFQ9NQ94 594 aaKnown RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-222ENST00000570139 RLIMQ9NVW2 624 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 CFAP97Q9P2B7 532 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 FBXO40Q9UH90 709 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 SLC45A1Q9Y2W3 748 aa7.7□□□□□ -1.18
CNOT1-222ENST00000570139 COL11A1P12107 1806 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 BAZ2BQ9UIF8 2168 aaKnown RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 SYCE3A1L190 88 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 PYCARD-AS1I3L0S3 204 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 HRKO00198 91 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 IPO5O00410 1097 aaKnown RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 ITGA10O75578 1167 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 BAIAP3O94812 1187 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 CCDC192P0DO97 292 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 MTHFD1P11586 935 aaKnown RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 PCSK1P29120 753 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 CIITAP33076 1130 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 PTPN7P35236 360 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 HSD17B4P51659 736 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 YBX1P67809 324 aaKnown RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 POU6F2P78424 691 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 ZNF200P98182 395 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 SP140Q13342 867 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 DOC2BQ14184 412 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 PDIA5Q14554 519 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 EIF4HQ15056 248 aaKnown RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 PLCL1Q15111 1095 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 ZRSR1Q15695 479 aaKnown RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 CALCRLQ16602 461 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 Q4G0T1 1027 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 PABPC1LQ4VXU2 614 aaKnown RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 NKAPLQ5M9Q1 402 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 UNC13DQ70J99 1090 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 PLXDC1Q8IUK5 500 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 ESX1Q8N693 406 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 AGBL5Q8NDL9 886 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 RUBCNQ92622 972 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 LRRC46Q96FV0 321 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 MBOAT7Q96N66 472 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 CNPPD1Q9BV87 410 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 SAYSD1Q9NPB0 183 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 SPATA6Q9NWH7 488 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.69□□□□□ -1.18
CNOT1-222ENST00000570139 ITGB1BP2Q9UKP3 347 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 AGTPBP1Q9UPW5 1226 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 CTNND2Q9UQB3 1225 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 MYH7BA7E2Y1 1941 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 ZNF536O15090 1300 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 FRMPD4Q14CM0 1322 aa7.69□□□□□ -1.18
CNOT1-222ENST00000570139 A0A1B0GVL5 298 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 VWA3AA6NCI4 1184 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 AQP12BA6NM10 295 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 STAM2O75886 525 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 ZNF202O95125 648 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 ITGA5P08648 1049 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 MRE11P49959 708 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 NDUFA8P51970 172 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 ITGA1P56199 1179 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 IRX3P78415 501 aaPredicted RBP7.68□□□□□ -1.18
CNOT1-222ENST00000570139 DUSP2Q05923 314 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 KIF22Q14807 665 aa7.68□□□□□ -1.18
CNOT1-222ENST00000570139 TARBP2Q15633 366 aaKnown RBP7.68□□□□□ -1.18
CNOT1-222ENST00000570139 UBE2SQ16763 222 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms