RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 M0QZQ0 153 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 NVLO15381 856 aaKnown RBP6.87□□□□□ -1.31
HERC1-208ENST00000560462 GREM1O60565 184 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 SDC3O75056 442 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 SEMA4FO95754 770 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 HDCP19113 662 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 NR1D1P20393 614 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 MSX1P28360 303 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 HSPA4P34932 840 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 ADCY7P51828 1080 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 ZNF132P52740 706 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 ZXDBP98169 803 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 LTBQ06643 244 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 POU4F2Q12837 409 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 CAPSQ13938 189 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 SEPT6Q14141 434 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
HERC1-208ENST00000560462 MCMDC2Q4G0Z9 681 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 SLC39A12Q504Y0 691 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 LY6G5CQ5SRR4 150 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 XYLT1Q86Y38 959 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 TRMT2AQ8IZ69 625 aaKnown RBP6.87□□□□□ -1.31
HERC1-208ENST00000560462 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 ZNF276Q8N554 614 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 OR4C6Q8NH72 309 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 CTCFLQ8NI51 663 aaPredicted RBP6.87□□□□□ -1.31
HERC1-208ENST00000560462 SCFD1Q8WVM8 642 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 CEP63Q96MT8 703 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 LZTS2Q9BRK4 669 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 TEKT3Q9BXF9 490 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 TRIM55Q9BYV6 548 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 SLC29A3Q9BZD2 475 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 CEP44Q9C0F1 390 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 GSX1Q9H4S2 264 aaPredicted RBP6.87□□□□□ -1.31
HERC1-208ENST00000560462 GCNT4Q9P109 453 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 UXTQ9UBK9 157 aaPredicted RBP6.87□□□□□ -1.31
HERC1-208ENST00000560462 ACANP16112 2415 aa6.87□□□□□ -1.31
HERC1-208ENST00000560462 MAP1AP78559 2803 aaPredicted RBP6.86□□□□□ -1.31
HERC1-208ENST00000560462 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 FAM221AA4D161 298 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 TRIM24O15164 1050 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 HOXC11O43248 304 aaPredicted RBP6.86□□□□□ -1.31
HERC1-208ENST00000560462 GRID2O43424 1007 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 TCEA3O75764 348 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 CNTN5O94779 1100 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 CSH1P0DML2 217 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 CSH2P0DML3 217 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 CD38P28907 300 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 UGT1A5P35504 534 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 ETFBP38117 255 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 CTSOP43234 321 aaPredicted RBP6.86□□□□□ -1.31
HERC1-208ENST00000560462 PDE6CP51160 858 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 NXPH1P58417 271 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 PSMC5P62195 406 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 DHX8Q14562 1220 aaKnown RBP6.86□□□□□ -1.31
HERC1-208ENST00000560462 ATF7IP2Q5U623 682 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 LRCH2Q5VUJ6 765 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 GRAMD4Q6IC98 578 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 OVOS1Q6IE37 1185 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 ASB18Q6ZVZ8 466 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 LYSMD3Q7Z3D4 306 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 NLRP8Q86W28 1048 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 ZFAND4Q86XD8 727 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 FBXO39Q8N4B4 442 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 STKLD1Q8NE28 680 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 OR13H1Q8NG92 308 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 RNF217Q8TC41 542 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 IFI44Q8TCB0 444 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 OTUD7AQ8TE49 926 aaPredicted RBP6.86□□□□□ -1.31
HERC1-208ENST00000560462 APOBEC4Q8WW27 367 aaKnown RBP6.86□□□□□ -1.31
HERC1-208ENST00000560462 CRYGNQ8WXF5 182 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 FAM227BQ96M60 508 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 BTBD1Q9H0C5 482 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 ABCB6Q9NP58 842 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 PRMT7Q9NVM4 692 aaPredicted RBP6.86□□□□□ -1.31
HERC1-208ENST00000560462 SALL4Q9UJQ4 1053 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 STON1Q9Y6Q2 735 aa6.86□□□□□ -1.31
HERC1-208ENST00000560462 NSD1Q96L73 2696 aaPredicted RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 A0A0D9SFI3 127 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 A0A1W2PPC4 97 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 ERICH2A1L162 156 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 PRRT4C9JH25 899 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 TLR4O00206 839 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 MSH4O15457 936 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 FFAR2O15552 330 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 PRICKLE3O43900 615 aaPredicted RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 IGHV4-34P06331 123 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 HAPLN1P10915 354 aaPredicted RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 CAPN3P20807 821 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 CSTF2P33240 577 aaKnown RBP eCLIP6.85□□□□□ -1.31
HERC1-208ENST00000560462 YARSP54577 528 aaKnown RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 NAPAP54920 295 aa6.85□□□□□ -1.31
HERC1-208ENST00000560462 EIF3IQ13347 325 aaKnown RBP6.85□□□□□ -1.31
HERC1-208ENST00000560462 ANO4Q32M45 955 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms