RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 HOXD12P35452 270 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 MTNR1BP49286 362 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 CDR1P51861 262 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 SLC16A1P53985 500 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 CDC42EP1Q00587 391 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 PPP3CAQ08209 521 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 PRPF4BQ13523 1007 aaKnown RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 VGLL4Q14135 290 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 TARBP2Q15633 366 aaKnown RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 UGCGQ16739 394 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 ZACNQ401N2 412 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 SLC45A4Q5BKX6 768 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 SEL1L2Q5TEA6 688 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 LIN9Q5TKA1 542 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 ACAD10Q6JQN1 1059 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 LRIG3Q6UXM1 1119 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 DSTYKQ6XUX3 929 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 LEKR1Q6ZMV7 388 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 C15orf39Q6ZRI6 1047 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 CEP128Q6ZU80 1094 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.56□□□□□ -1.2
MARK3-212ENST00000558223 PRR18Q8N4B5 295 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 TTC39CQ8N584 583 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 ARFGAP2Q8N6H7 521 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 METTL13Q8N6R0 699 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 PCYOX1LQ8NBM8 494 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 FRS2Q8WU20 508 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 NELL1Q92832 810 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 ATP6V1E2Q96A05 226 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 CGRRF1Q99675 332 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 LRFN3Q9BTN0 628 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 QRSL1Q9H0R6 528 aaKnown RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 SMARCAD1Q9H4L7 1026 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 TAF1DQ9H5J8 278 aaPredicted RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 BRD9Q9H8M2 597 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 IPPKQ9H8X2 491 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 SP110Q9HB58 689 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 PDE11AQ9HCR9 933 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 UBN1Q9NPG3 1134 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 GPRC5CQ9NQ84 441 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 RBM12Q9NTZ6 932 aaKnown RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 SEPT11Q9NVA2 429 aaKnown RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 GPATCH2Q9NW75 528 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 GFOD1Q9NXC2 390 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 CTTNBP2NLQ9P2B4 639 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 AGO2Q9UKV8 859 aaKnown RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 HPCAL4Q9UM19 191 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 TFR2Q9UP52 801 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 MAGED1Q9Y5V3 778 aaPredicted RBP7.56□□□□□ -1.2
MARK3-212ENST00000558223 ST14Q9Y5Y6 855 aa7.56□□□□□ -1.2
MARK3-212ENST00000558223 A0A0B4J269 797 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 LRRIQ3A6PVS8 624 aaPredicted RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 B4E171 279 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 LINC01387J3KSC0 135 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 WNT9AO14904 365 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 MAGEB2O15479 319 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 THAP12O43422 761 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 OIP5O43482 229 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 STRNO43815 780 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 HBP1O60381 514 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 BUB1BO60566 1050 aaPredicted RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 RPS6KA5O75582 802 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 TOM1L1O75674 476 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 FARP2O94887 1054 aaPredicted RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 SLITRK5O94991 958 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 CYP11B1P15538 503 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 RPL17P18621 184 aaKnown RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 CNTFP26441 200 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 CXCR5P32302 372 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 TSPAN7P41732 249 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 MATR3P43243 847 aaKnown RBP eCLIP7.55□□□□□ -1.24e-11■■■■□ 24.8
MARK3-212ENST00000558223 EIF3BP55884 814 aaKnown RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 TAP1Q03518 808 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 PTP4A2Q12974 167 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 SLBPQ14493 270 aaKnown RBP eCLIP7.55□□□□□ -1.2
MARK3-212ENST00000558223 R3HDM1Q15032 1099 aaKnown RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 TAF5Q15542 800 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 C1orf220Q5T0J3 134 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 PLA2G4FQ68DD2 849 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 C1orf229Q6ZS94 237 aaPredicted RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 CBWD2Q8IUF1 395 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 WDR49Q8IV35 697 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 KSR1Q8IVT5 923 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 CCDC60Q8IWA6 550 aaPredicted RBP7.55□□□□□ -1.2
MARK3-212ENST00000558223 ABRAQ8N0Z2 381 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 ESX1Q8N693 406 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 IL22RA1Q8N6P7 574 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 NKAIN3Q8N8D7 197 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 LSMEM1Q8N8F7 131 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 NPLOC4Q8TAT6 608 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 BRI3BPQ8WY22 251 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 SEC14L1Q92503 715 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 COPS5Q92905 334 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 CCDC127Q96BQ5 260 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 KRT12Q99456 494 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 PACSIN1Q9BY11 444 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 NFKBIZQ9BYH8 718 aa7.55□□□□□ -1.2
MARK3-212ENST00000558223 ZNF518BQ9C0D4 1074 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms