RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PCDHGB3Q9Y5G1 929 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ATP7BP35670 1465 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PECAM1P16284 738 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 RIPK1Q13546 671 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SGF29Q96ES7 293 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 GIT1Q9Y2X7 761 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 CDK12Q9NYV4 1490 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 TMCC2O75069 709 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ACAT1P24752 427 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SDC2P34741 201 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF135P52742 658 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 FAM228AQ86W67 206 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PLOD2O00469 737 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 EPN2O95208 641 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 F9P00740 461 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ZCCHC18P0CG32 403 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 RBP3P10745 1247 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SERPINB5P36952 375 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 OMPP47874 163 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PDIA6Q15084 440 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 LLGL1Q15334 1064 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 LACTB2Q53H82 288 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SDR42E1Q8WUS8 393 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 TBCDQ9BTW9 1192 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PCSK1NQ9UHG2 260 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 IFNA6P05013 189 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ATXN8OSP0DMR3 200 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 TMEM132DQ14C87 1099 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 HLA-DQA1Q5Y7H0 255 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 CYLDQ9NQC7 956 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SSR3Q9UNL2 185 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 KIF28PB7ZC32 967 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 NOL4O94818 638 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 DENND5AQ6IQ26 1287 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 WDR93Q6P2C0 686 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 FOXP4Q8IVH2 680 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SEC31BQ9NQW1 1179 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PHTF1Q9UMS5 762 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PCDHGC5Q9Y5F6 944 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 RBMXL2O75526 392 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 UBA1P22314 1058 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PTPN3P26045 913 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 GPR15P49685 360 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 SCAIQ8N9R8 606 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 INO80EQ8NBZ0 244 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 RMDN3Q96TC7 470 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PUS7LQ9H0K6 701 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 KCNN2Q9H2S1 579 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 MUC13Q9H3R2 512 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ADGRF5Q8IZF2 1346 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 ESYT3A0FGR9 886 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 CYP2A7P20853 494 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PDCD4Q53EL6 469 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 AKIRIN2Q53H80 203 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 FAM118BQ9BPY3 351 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 CHMP1AQ9HD42 196 aaPredicted RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 UBQLN1Q9UMX0 589 aaKnown RBP9.04□□□□□ -0.96
SYNE3-205ENST00000557275 PCDHGA10Q9Y5H3 936 aa9.04□□□□□ -0.96
SYNE3-205ENST00000557275 RENBPP51606 427 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MSLNQ13421 630 aaPredicted RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MKLN1Q9UL63 735 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 SH3BP1Q9Y3L3 701 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 UTYO14607 1347 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 A0A1W2PP64 1363 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 LINC00854A0A1B0GVQ3 168 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 CLK3P49761 638 aaKnown RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 CASP5P51878 434 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 LRRC41Q15345 812 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 NAB2Q15742 525 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ZHX1-C8orf76Q96EF9 292 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MKNK1Q9BUB5 465 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 PNPLA3Q9NST1 481 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MYH1P12882 1939 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MYH4Q9Y623 1939 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 CYP2C9P11712 490 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 DAW1Q8N136 415 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 GRIP1Q9Y3R0 1128 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 IFNA7P01567 189 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 SLC20A2Q08357 652 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 PDIA5Q14554 519 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 NAIF1Q69YI7 327 aaPredicted RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 AGMOQ6ZNB7 445 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 DENND6BQ8NEG7 585 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MYCBPAPQ8TBZ2 947 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 C1orf54Q8WWF1 131 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 PABPC5Q96DU9 382 aaKnown RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 SENP2Q9HC62 589 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 C15orf41Q9Y2V0 281 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 NDUFAF1Q9Y375 327 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 TNPO3Q9Y5L0 923 aaKnown RBP9.03□□□□□ -0.96
SYNE3-205ENST00000557275 A2MP01023 1474 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 MAPK9P45984 424 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 NT5C1AQ9BXI3 368 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 LRRC40Q9H9A6 602 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ITGA3P26006 1051 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 GPD2P43304 727 aa9.03□□□□□ -0.96
SYNE3-205ENST00000557275 ZC2HC1CQ53FD0 456 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms