RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TSC2P49815 1807 aa6.1□□□□□ -1.43
ATXN3-245ENST00000556958 PCNX1Q96RV3 2341 aa6.1□□□□□ -1.43
ATXN3-245ENST00000556958 MTORP42345 2549 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 A1L4Q6 167 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 LACTBL1A8MY62 500 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 NEDD8-MDP1E9PL57 170 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TLR4O00206 839 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 PIRO00625 290 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 SLC27A2O14975 620 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TIMM44O43615 452 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 SIGLEC6O43699 453 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 OLFM2O95897 454 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 ITGA2BP08514 1039 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 CXCL8P10145 99 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 ALPPL2P10696 532 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TYRP14679 529 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 CHMLP26374 656 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 MATR3P43243 847 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATXN3-245ENST00000556958 MAGEA11P43364 429 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TAF6P49848 677 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 CLDN10P78369 228 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 EXOSC10Q01780 885 aaKnown RBP6.09□□□□□ -1.43
ATXN3-245ENST00000556958 KCNAB2Q13303 367 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 ENPP2Q13822 863 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 PDIA5Q14554 519 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 CLCA4Q14CN2 919 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 MANEAQ5SRI9 462 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TDRD10Q5VZ19 366 aaKnown RBP6.09□□□□□ -1.43
ATXN3-245ENST00000556958 C9orf57Q5W0N0 161 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 KIAA0895LQ68EN5 471 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 FOXR1Q6PIV2 292 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 C4orf50Q6ZRC1 276 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 DENND5BQ6ZUT9 1274 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 CHD1LQ86WJ1 897 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TRIM22Q8IYM9 498 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 OR2T3Q8NH03 318 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 MAPK15Q8TD08 544 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 SLITRK1Q96PX8 696 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 INSM2Q96T92 566 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-245ENST00000556958 SLC26A6Q9BXS9 759 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TRIM9Q9C026 710 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 CCSER1Q9C0I3 900 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 FBRSQ9HAH7 460 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 USP29Q9HBJ7 922 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TUFT1Q9NNX1 390 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TMLHEQ9NVH6 421 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 NOVA2Q9UNW9 492 aaKnown RBP6.09□□□□□ -1.43
ATXN3-245ENST00000556958 PCDHGA7Q9Y5G6 932 aa6.09□□□□□ -1.43
ATXN3-245ENST00000556958 UTP20O75691 2785 aaKnown RBP6.09□□□□□ -1.43
ATXN3-245ENST00000556958 TDRD15B5MCY1 1934 aaKnown RBP6.09□□□□□ -1.44
ATXN3-245ENST00000556958 PDCD11Q14690 1871 aaKnown RBP6.09□□□□□ -1.44
ATXN3-245ENST00000556958 KPNA7A9QM74 516 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 M0R2N6 131 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 TRIM38O00635 465 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ABLIM1O14639 778 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 PPEF2O14830 753 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 OAS1P00973 400 aaKnown RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 DNTTP04053 509 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 EPHX1P07099 455 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 CISD3P0C7P0 127 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 CKMT1AP12532 417 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 PDIA4P13667 645 aaKnown RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 IFNAR1P17181 557 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ACO1P21399 889 aaKnown RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ANXA13P27216 316 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 PCSK1P29120 753 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 NPTX2P47972 431 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 HARS2P49590 506 aaKnown RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 GUCY2FP51841 1108 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 COPAP53621 1224 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 PEX3P56589 373 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 NXPH1P58417 271 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ARID5AQ03989 594 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 MCL1Q07820 350 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 TTC31Q49AM3 519 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 SEZ6Q53EL9 994 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 CREB3L3Q68CJ9 461 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 VSTM1Q6UX27 236 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ZPBP2Q6X784 338 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 HEATR4Q86WZ0 1026 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 BBS7Q8IWZ6 715 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF837Q96EG3 531 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 PRR11Q96HE9 360 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ZBTB45Q96K62 511 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 HEXIM2Q96MH2 286 aaKnown RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 SLC6A18Q96N87 628 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 GZF1Q9H116 711 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 KMT5AQ9NQR1 393 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 MARK1Q9P0L2 795 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 MAGEC2Q9UBF1 373 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-245ENST00000556958 LRWD1Q9UFC0 647 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 GTF3C4Q9UKN8 822 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 PHTF1Q9UMS5 762 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 SLC27A6Q9Y2P4 619 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 DERAQ9Y315 318 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 F8P00451 2351 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ICE1Q9Y2F5 2266 aa6.08□□□□□ -1.44
ATXN3-245ENST00000556958 ADAMTS9Q9P2N4 1935 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms