RNA–Protein interactions for RNA: ENST00000555516.6

TRIP11-204, Transcript of thyroid hormone receptor interactor 11, human

APPRIS ALT2 TSL 5

Gene TRIP11, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIP11-204	ENST00000555516	ZCRB1	Q8TBF4	217 aa	Known RBP	4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	STAG1	Q8WVM7	1258 aa		4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	MIB2	Q96AX9	1013 aa		4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	LRGUK	Q96M69	825 aa		4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	CINP	Q9BW66	212 aa	Predicted RBP	4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	KRTAP4-4	Q9BYR3	166 aa		4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	ARHGAP39	Q9C0H5	1083 aa		4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	MOV10	Q9HCE1	1003 aa	Known RBP	4.26	□□□□□ -1.73
TRIP11-204	ENST00000555516	KIF21B	O75037	1637 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	PRY	O14603	147 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	TPH1	P17752	444 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	RAB27A	P51159	221 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	FMO1	Q01740	532 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	MZT2A	Q6P582	158 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	CLEC9A	Q6UXN8	241 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	RBM23	Q86U06	439 aa	Known RBP	4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	PIGK	Q92643	395 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	MSLNL	Q96KJ4	702 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	FAM227B	Q96M60	508 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	ABHD10	Q9NUJ1	306 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	ARL8B	Q9NVJ2	186 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	PCDHA7	Q9UN72	937 aa		4.25	□□□□□ -1.73
TRIP11-204	ENST00000555516	LTBP4	Q8N2S1	1624 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	NEO1	Q92859	1461 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516		A6NNZ2	444 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	WDR47	O94967	919 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	TMEM225B	P0DP42	221 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	TGFB3	P10600	412 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	BRAF	P15056	766 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	ST6GAL1	P15907	406 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	TFEB	P19484	476 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	GAB1	Q13480	694 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	KCNJ12	Q14500	433 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	ASIC2	Q16515	512 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	NUGGC	Q68CJ6	796 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	SESTD1	Q86VW0	696 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	SUN3	Q8TAQ9	357 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	WDR24	Q96S15	920 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	PIMREG	Q9BSJ6	248 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	MYLK2	Q9H1R3	596 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	THSD1	Q9NS62	852 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	HDAC9	Q9UKV0	1011 aa		4.24	□□□□□ -1.73
TRIP11-204	ENST00000555516	TRIP12	Q14669	1992 aa	Predicted RBP	4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	KIR2DS5	A0A0G2JLQ3	304 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	KIR2DS3	K7RE56	304 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	USP12	O75317	370 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	INMT	O95050	263 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	SYF2	O95926	243 aa	Known RBP	4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	HOXD12	P35452	270 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	ZNF84	P51523	738 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	PTPRO	Q16827	1216 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	B4GALNT4	Q76KP1	1039 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	YAF2	Q8IY57	180 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	GJA10	Q969M2	543 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	ZCWPW1	Q9H0M4	648 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	RXFP3	Q9NSD7	469 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	GJB4	Q9NTQ9	266 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	MDFIC	Q9P1T7	246 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	HPSE	Q9Y251	543 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	MADD	Q8WXG6	1647 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	FANCA	O15360	1455 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	MAGI2	Q86UL8	1455 aa		4.23	□□□□□ -1.73
TRIP11-204	ENST00000555516	CUL7	Q14999	1698 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	SPATA31A5	Q5VU36	1347 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	SPATA31A7	Q8IWB4	1347 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	STRC	Q7RTU9	1775 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	CLEC18A	A5D8T8	446 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	ERVV-2	B6SEH9	535 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	CTNND1	O60716	968 aa	Known RBP	4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	SNX2	O60749	519 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	NDUFS1	P28331	727 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	DUSP1	P28562	367 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	PPAT	Q06203	517 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	MTA1	Q13330	715 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	KEAP1	Q14145	624 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	PTGR1	Q14914	329 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	PIK3CD-AS1	Q5SR53	167 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	FAM90A2P	Q658T7	463 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	UNC13D	Q70J99	1090 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	CLEC18C	Q8NCF0	446 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	CD93	Q9NPY3	652 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	TPCN1	Q9ULQ1	816 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	NOP58	Q9Y2X3	529 aa	Known RBP	4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	MED1	Q15648	1581 aa	Predicted RBP	4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	PREX1	Q8TCU6	1659 aa		4.22	□□□□□ -1.73
TRIP11-204	ENST00000555516	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.21	□□□□□ -1.73
TRIP11-204	ENST00000555516	UHRF1BP1	Q6BDS2	1440 aa		4.21	□□□□□ -1.73
TRIP11-204	ENST00000555516	AKNA	Q7Z591	1439 aa		4.21	□□□□□ -1.73
TRIP11-204	ENST00000555516	CFAP69	A5D8W1	941 aa		4.21	□□□□□ -1.74
TRIP11-204	ENST00000555516	PRPF3	O43395	683 aa	Known RBP	4.21	□□□□□ -1.74
TRIP11-204	ENST00000555516	MARCH6	O60337	910 aa		4.21	□□□□□ -1.74
TRIP11-204	ENST00000555516	WNT1	P04628	370 aa		4.21	□□□□□ -1.74
TRIP11-204	ENST00000555516	HSPA1L	P34931	641 aa		4.21	□□□□□ -1.74
TRIP11-204	ENST00000555516	PGM5	Q15124	567 aa		4.21	□□□□□ -1.74
TRIP11-204	ENST00000555516	CNGA3	Q16281	694 aa		4.21	□□□□□ -1.74
TRIP11-204	ENST00000555516	SMTNL2	Q2TAL5	461 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms