RNA–Protein interactions for RNA: ENST00000555516.6

TRIP11-204, Transcript of thyroid hormone receptor interactor 11, humanhuman

APPRIS ALT2 TSL 5

Gene TRIP11, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP11-204ENST00000555516 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
TRIP11-204ENST00000555516 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
TRIP11-204ENST00000555516 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
TRIP11-204ENST00000555516 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
TRIP11-204ENST00000555516 FOXD1Q16676 465 aa22.5■■□□□ 1.19
TRIP11-204ENST00000555516 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
TRIP11-204ENST00000555516 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
TRIP11-204ENST00000555516 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
TRIP11-204ENST00000555516 ADRA2BP18089 450 aa21.01■□□□□ 0.95
TRIP11-204ENST00000555516 PIAS4Q8N2W9 510 aaPredicted RBP20.97■□□□□ 0.95
TRIP11-204ENST00000555516 MSH5O43196 834 aa20.96■□□□□ 0.95
TRIP11-204ENST00000555516 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
TRIP11-204ENST00000555516 DMRT2Q9Y5R5 561 aa19.18■□□□□ 0.66
TRIP11-204ENST00000555516 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
TRIP11-204ENST00000555516 PPP4R3CPQ6ZMV5 832 aa18.92■□□□□ 0.62
TRIP11-204ENST00000555516 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
TRIP11-204ENST00000555516 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
TRIP11-204ENST00000555516 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
TRIP11-204ENST00000555516 DCAF8L1A6NGE4 600 aa18.17■□□□□ 0.5
TRIP11-204ENST00000555516 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
TRIP11-204ENST00000555516 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
TRIP11-204ENST00000555516 RNF39Q9H2S5 420 aa17.96■□□□□ 0.47
TRIP11-204ENST00000555516 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
TRIP11-204ENST00000555516 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
TRIP11-204ENST00000555516 KCNA4P22459 653 aa17.74■□□□□ 0.43
TRIP11-204ENST00000555516 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
TRIP11-204ENST00000555516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.391e-7■■□□□ 12.6
TRIP11-204ENST00000555516 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
TRIP11-204ENST00000555516 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
TRIP11-204ENST00000555516 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
TRIP11-204ENST00000555516 DSG3P32926 999 aa16.84■□□□□ 0.29
TRIP11-204ENST00000555516 CAPN15O75808 1086 aa16.82■□□□□ 0.28
TRIP11-204ENST00000555516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
TRIP11-204ENST00000555516 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
TRIP11-204ENST00000555516 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
TRIP11-204ENST00000555516 APLP2Q06481 763 aa16.67■□□□□ 0.26
TRIP11-204ENST00000555516 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
TRIP11-204ENST00000555516 MYCNP04198 464 aaPredicted RBP16.61■□□□□ 0.25
TRIP11-204ENST00000555516 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
TRIP11-204ENST00000555516 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
TRIP11-204ENST00000555516 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
TRIP11-204ENST00000555516 ABCB7O75027 752 aa16.47■□□□□ 0.23
TRIP11-204ENST00000555516 POTEHQ6S545 545 aa16.42■□□□□ 0.22
TRIP11-204ENST00000555516 ZBTB22O15209 634 aa16.38■□□□□ 0.21
TRIP11-204ENST00000555516 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.2
TRIP11-204ENST00000555516 POLA2Q14181 598 aa16.21■□□□□ 0.19
TRIP11-204ENST00000555516 ATXN8OSP0DMR3 200 aa16.01■□□□□ 0.15
TRIP11-204ENST00000555516 RBM42Q9BTD8 480 aaKnown RBP15.99■□□□□ 0.15
TRIP11-204ENST00000555516 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
TRIP11-204ENST00000555516 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
TRIP11-204ENST00000555516 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
TRIP11-204ENST00000555516 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
TRIP11-204ENST00000555516 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
TRIP11-204ENST00000555516 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
TRIP11-204ENST00000555516 REM2Q8IYK8 340 aaPredicted RBP15.53■□□□□ 0.08
TRIP11-204ENST00000555516 FBLN2P98095 1184 aa15.49■□□□□ 0.07
TRIP11-204ENST00000555516 SPDYE2BA6NHP3 402 aa15.45■□□□□ 0.06
TRIP11-204ENST00000555516 SPDYE6P0CI01 402 aa15.45■□□□□ 0.06
TRIP11-204ENST00000555516 SPDYE2Q495Y8 402 aa15.45■□□□□ 0.06
TRIP11-204ENST00000555516 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
TRIP11-204ENST00000555516 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
TRIP11-204ENST00000555516 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
TRIP11-204ENST00000555516 PIP4P2Q8N4L2 257 aa15.3■□□□□ 0.04
TRIP11-204ENST00000555516 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRIP11-204ENST00000555516 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
TRIP11-204ENST00000555516 SPDYE1Q8NFV5 336 aaPredicted RBP15.11■□□□□ 0.01
TRIP11-204ENST00000555516 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
TRIP11-204ENST00000555516 PABPN1Q86U42 306 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRIP11-204ENST00000555516 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
TRIP11-204ENST00000555516 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
TRIP11-204ENST00000555516 HAX1O00165 279 aa14.88□□□□□ -0.03
TRIP11-204ENST00000555516 EVX2Q03828 476 aa14.84□□□□□ -0.03
TRIP11-204ENST00000555516 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
TRIP11-204ENST00000555516 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
TRIP11-204ENST00000555516 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
TRIP11-204ENST00000555516 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
TRIP11-204ENST00000555516 PROM2Q8N271 834 aa14.6□□□□□ -0.07
TRIP11-204ENST00000555516 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
TRIP11-204ENST00000555516 FARP1Q9Y4F1 1045 aaPredicted RBP14.6□□□□□ -0.07
TRIP11-204ENST00000555516 CREBZFQ9NS37 354 aa14.57□□□□□ -0.08
TRIP11-204ENST00000555516 GABBR2O75899 941 aa14.47□□□□□ -0.09
TRIP11-204ENST00000555516 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
TRIP11-204ENST00000555516 MNX1P50219 401 aaPredicted RBP14.4□□□□□ -0.1
TRIP11-204ENST00000555516 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
TRIP11-204ENST00000555516 CLCN6P51797 869 aa14.28□□□□□ -0.12
TRIP11-204ENST00000555516 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
TRIP11-204ENST00000555516 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
TRIP11-204ENST00000555516 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRIP11-204ENST00000555516 LHX8Q68G74 356 aa14.15□□□□□ -0.14
TRIP11-204ENST00000555516 FKBP8Q14318 412 aa14.11□□□□□ -0.15
TRIP11-204ENST00000555516 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
TRIP11-204ENST00000555516 PHF12Q96QT6 1004 aa14.1□□□□□ -0.15
TRIP11-204ENST00000555516 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
TRIP11-204ENST00000555516 MIER1Q8N108 512 aa14□□□□□ -0.17
TRIP11-204ENST00000555516 DCBLD2Q96PD2 775 aa14□□□□□ -0.17
TRIP11-204ENST00000555516 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
TRIP11-204ENST00000555516 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
TRIP11-204ENST00000555516 MS4A3Q96HJ5 214 aa13.93□□□□□ -0.18
TRIP11-204ENST00000555516 TSPYL2Q9H2G4 693 aaPredicted RBP13.93□□□□□ -0.18
TRIP11-204ENST00000555516 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms