RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CDH18Q13634 790 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 TCHHL1Q5QJ38 904 aaPredicted RBP14.29□□□□□ -0.12
VTI1B-204ENST00000554659 KCNMB4Q86W47 210 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 ANKRD13AQ8IZ07 590 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 MIER2Q8N344 545 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 OR6Y1Q8NGX8 325 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 ZKSCAN4Q969J2 545 aaPredicted RBP14.29□□□□□ -0.12
VTI1B-204ENST00000554659 RNPEPL1Q9HAU8 725 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 RRN3Q9NYV6 651 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 SPATA2Q9UM82 520 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 SPATA31A5Q5VU36 1347 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 SPATA31A7Q8IWB4 1347 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CETPP11597 493 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 ME2P23368 584 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 ALDH1A3P47895 512 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 RNF43Q68DV7 783 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 MAGED4Q96JG8 741 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CLPBQ9H078 707 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 KCNQ5Q9NR82 932 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 COPG2Q9UBF2 871 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 TSPAN16Q9UKR8 245 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 DSEQ9UL01 958 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 SORCS3Q9UPU3 1222 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 MEGF6O75095 1541 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 MEI4A8MW99 385 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 HSMCR30P0CW71 290 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CXCL8P10145 99 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 DMPKQ09013 629 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CBWD6Q4V339 395 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CBWD3Q5JTY5 395 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 CBWD5Q5RIA9 395 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 DEPDC7Q96QD5 511 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 BDH2Q9BUT1 245 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 TRHDEQ9UKU6 1024 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 NCANO14594 1321 aa14.29□□□□□ -0.12
VTI1B-204ENST00000554659 DDTLA6NHG4 134 aaPredicted RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PLA2G6O60733 806 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 BAIAP3O94812 1187 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PSMG1O95456 288 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 CSE1LP55060 971 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 OXCT1P55809 520 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 XRCC4Q13426 336 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 FAM98BQ52LJ0 330 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 C11orf96Q7Z7L8 435 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 MAP4K3Q8IVH8 894 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 YAF2Q8IY57 180 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 TMCC3Q9ULS5 477 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 A0A096LPK6 155 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PDZK1P1A8MUH7 402 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 IFNA14P01570 189 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 DDX39BQ13838 428 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ARMC4Q5T2S8 1044 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 METTL7BQ6UX53 244 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 SCUBE2Q9NQ36 999 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ARHGEF3Q9NR81 526 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 NFKBIL1Q9UBC1 381 aaPredicted RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 DAPK2Q9UIK4 370 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 KIF20BQ96Q89 1820 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PIPSLA2A3N6 862 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 TMEM191CA6NGB0 347 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 B3GAT3O94766 335 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ITGALP20701 1170 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 SKIV2L2P42285 1042 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 POLD3Q15054 466 aaPredicted RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PRAMEF18Q5VWM3 479 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 DNERQ8NFT8 737 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 MPP4Q96JB8 637 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PRDM4Q9UKN5 801 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 UNC5CO95185 931 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 DNAJB2P25686 324 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 TKTL1P51854 596 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 DRG2P55039 364 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 TRAF2Q12933 501 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 AUHQ13825 339 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 NCF4Q15080 339 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PREPLQ4J6C6 727 aaPredicted RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 FBXO47Q5MNV8 452 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 SLC44A2Q8IWA5 706 aaPredicted RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 C19orf18Q8NEA5 215 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 CPB2Q96IY4 423 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ARMCX1Q9P291 453 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 MYRFQ9Y2G1 1151 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 GPR182O15218 404 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 CNOT3O75175 753 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ABHD2P08910 425 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ALOX15P16050 662 aaPredicted RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 CYP2B6P20813 491 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 MGAT1P26572 445 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 KRT20P35900 424 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 CCT8P50990 548 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 FASTKQ14296 549 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 WDR59Q6PJI9 974 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 DLG3Q92796 817 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 FAM120BQ96EK7 910 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 NSMCE2Q96MF7 247 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 PAIP1Q9H074 479 aaKnown RBP14.28□□□□□ -0.12
VTI1B-204ENST00000554659 KLHL31Q9H511 634 aa14.28□□□□□ -0.12
VTI1B-204ENST00000554659 ZNF862O60290 1169 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms