RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CCDC117Q8IWD4 279 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-211ENST00000554437 OR1N1Q8NGS0 311 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 PNISRQ8TF01 805 aaKnown RBP5.78□□□□□ -1.48
SCFD1-211ENST00000554437 GLMPQ8WWB7 406 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 NPIPB3Q92617 1050 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 FAR2Q96K12 515 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 SH2D3AQ9BRG2 576 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 RNF26Q9BY78 433 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-211ENST00000554437 NUAK2Q9H093 628 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 CDCP1Q9H5V8 836 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 CCDC134Q9H6E4 229 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 PTPRHQ9HD43 1115 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 ARL8BQ9NVJ2 186 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 FLRT1Q9NZU1 646 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 SEMA5BQ9P283 1151 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 HERC5Q9UII4 1024 aaKnown RBP5.78□□□□□ -1.48
SCFD1-211ENST00000554437 NFU1Q9UMS0 254 aa5.78□□□□□ -1.48
SCFD1-211ENST00000554437 hCG_1642624A0A1W2PR95 340 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 GXYLT2A0PJZ3 443 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 KIF28PB7ZC32 967 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 PPP6CO00743 305 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 TUBB4AP04350 444 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 THBS4P35443 961 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 POLE2P56282 527 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 MRPS21P82921 87 aaKnown RBP5.77□□□□□ -1.49
SCFD1-211ENST00000554437 GAB1Q13480 694 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 ZNF268Q14587 947 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-211ENST00000554437 ZNF569Q5MCW4 686 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 KYAT3Q6YP21 454 aaKnown RBP5.77□□□□□ -1.49
SCFD1-211ENST00000554437 ZNF813Q6ZN06 617 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 CACNA2D3Q8IZS8 1091 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 OSR1Q8TAX0 266 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-211ENST00000554437 RSC1A1Q92681 617 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 REXO5Q96IC2 774 aaKnown RBP5.77□□□□□ -1.49
SCFD1-211ENST00000554437 RTKNQ9BST9 563 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 ELOVL1Q9BW60 279 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 PDGFCQ9NRA1 345 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 ASNSD1Q9NWL6 643 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 BCCIPQ9P287 314 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCFD1-211ENST00000554437 FRMD4BQ9Y2L6 1034 aa5.77□□□□□ -1.49
SCFD1-211ENST00000554437 WDR17Q8IZU2 1322 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 M0QYT0 321 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 PPP6R2O75170 966 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 TCEA3O75764 348 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 ACTL6BO94805 426 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 FBLP22087 321 aaKnown RBP5.76□□□□□ -1.49
SCFD1-211ENST00000554437 NDUFS1P28331 727 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 SLC8A1P32418 973 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 AGTR2P50052 363 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 SEC23BQ15437 767 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 AAK1Q2M2I8 961 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 GRAMD1BQ3KR37 738 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 KIAA1614Q5VZ46 1190 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 SULT6B1Q6IMI4 303 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 SEMA4CQ9C0C4 833 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 BRD8Q9H0E9 1235 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 MAGEH1Q9H213 219 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 KCNK9Q9NPC2 374 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 GRHPRQ9UBQ7 328 aa5.76□□□□□ -1.49
SCFD1-211ENST00000554437 LOC105369274A0A096LPK9 316 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 LOC102723532A0A0G2JNH3 316 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 C16orf96A6NNT2 1141 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 PRYO14603 147 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 DSCR3O14972 297 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 NKX2-8O15522 239 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 EPHB2P29323 1055 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 TACR3P29371 465 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 HOXD12P35452 270 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 AP2B1P63010 937 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 SF3A3Q12874 501 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCFD1-211ENST00000554437 CCDC142Q17RM4 750 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 WDR93Q6P2C0 686 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 YTHDF3Q7Z739 585 aaKnown RBP5.75□□□□□ -1.49
SCFD1-211ENST00000554437 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 CNGA4Q8IV77 575 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 SLC44A2Q8IWA5 706 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-211ENST00000554437 OR4N4Q8N0Y3 316 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 GALNT16Q8N428 558 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 MYCT1Q8N699 235 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 ZNF398Q8TD17 642 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 HMGB4Q8WW32 186 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 SENP7Q9BQF6 1050 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 PAGR1Q9BTK6 254 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 QTRT1Q9BXR0 403 aaKnown RBP5.75□□□□□ -1.49
SCFD1-211ENST00000554437 RAB21Q9UL25 225 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 CNTN6Q9UQ52 1028 aa5.75□□□□□ -1.49
SCFD1-211ENST00000554437 SIRT4Q9Y6E7 314 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-211ENST00000554437 FAM90A18PA6NE21 464 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 FAM90A16PA6NEW6 464 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 CGB1A6NKQ9 187 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 FAM90A9PA6NNJ1 464 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 FAM90A5PA8MXJ8 464 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 LARGE1O95461 756 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 CELA2AP08217 269 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 FAM90A15PP0C7V4 464 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 FAM90A14PP0C7W9 464 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 PEPDP12955 493 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 STAT6P42226 847 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 ARHGAP25P42331 645 aa5.74□□□□□ -1.49
SCFD1-211ENST00000554437 RNASELQ05823 741 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms