RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SEMA3GQ9NS98 782 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 DZANK1Q9NVP4 752 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ERAP1Q9NZ08 941 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MARK1Q9P0L2 795 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 FETUBQ9UGM5 382 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ATPIF1Q9UII2 106 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GDF2Q9UK05 429 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CORO2BQ9UQ03 480 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 NR2E1Q9Y466 385 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 KIF26AQ9ULI4 1882 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 hCG_1807616A0A1W2PRN6 198 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 KLRF2D3W0D1 207 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 KRIT1O00522 736 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 DYNC1I1O14576 645 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 IFIT3O14879 490 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 NPC1O15118 1278 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 TP73O15350 636 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SPINT1O43278 529 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CYTH3O43739 400 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 EXTL3O43909 919 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SLC22A3O75751 556 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SEC24DO94855 1032 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ERLIN2O94905 339 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 STAU1O95793 577 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CYP3A4P08684 503 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 HPGDP15428 266 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CPEP16870 476 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 LAG3P18627 525 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 EIF2AK2P19525 551 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 AVPR2P30518 371 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CTNNB1P35222 781 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 HOXD13P35453 343 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GNAQP50148 359 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CCT8P50990 548 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SCNN1BP51168 640 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ARHGDIBP52566 201 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CARD18P57730 90 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 DSTNP60981 165 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CEBPZQ03701 1054 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GALNT1Q10472 559 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CETN1Q12798 172 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PLD1Q13393 1074 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GRIK4Q16099 956 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SKIDA1Q1XH10 827 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SEZ6Q53EL9 994 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 FYB2Q5VWT5 728 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 IER5Q5VY09 327 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MTFR2Q6P444 385 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ZYG11AQ6WRX3 759 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 LINC00114Q6XXX2 140 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF574Q6ZN55 896 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CEP128Q6ZU80 1094 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PIWIL3Q7Z3Z3 882 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PTRH1Q86Y79 214 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CD302Q8IX05 232 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SYNPOQ8N3V7 929 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PRR18Q8N4B5 295 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF321PQ8N8H1 164 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CMASQ8NFW8 434 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 BCL7CQ8WUZ0 217 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CRYGNQ8WXF5 182 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 EXT2Q93063 718 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SLC35B4Q969S0 331 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 NXPE3Q969Y0 559 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 HSPBAP1Q96EW2 488 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ADAD1Q96M93 576 aaKnown RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 HS6ST2Q96MM7 605 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CITED4Q96RK1 184 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 TCF12Q99081 682 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PCYT2Q99447 389 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 SIKE1Q9BRV8 207 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GCOM2Q9BZD3 368 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 GBP3Q9H0R5 595 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 C2orf40Q9H1Z8 148 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 RHBGQ9H310 441 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PCOLCE2Q9UKZ9 415 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 BAG5Q9UL15 447 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MAGED2Q9UNF1 606 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 USP15Q9Y4E8 981 aaPredicted RBP2.83□□□□□ -1.96
PRPF39-206ENST00000554429 MAP4K5Q9Y4K4 846 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 ASB3Q9Y575 518 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 PCDHA1Q9Y5I3 950 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 LAMA3Q16787 3333 aa2.83□□□□□ -1.96
PRPF39-206ENST00000554429 CTAGE15A4D2H0 777 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 NCF1BA6NI72 391 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 NCF1CA8MVU1 366 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 DDX39AO00148 427 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 BACH1O14867 736 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 MAFKO60675 156 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ZC3H11AO75152 810 aaKnown RBP eCLIP2.82□□□□□ -1.966e-6■□□□□ 11.2
PRPF39-206ENST00000554429 ERAL1O75616 437 aaKnown RBP2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PALMO75781 387 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 ALDH1A2O94788 518 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CTAGE8P0CG41 777 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CALM1P0DP23 149 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CALM2P0DP24 149 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 CALM3P0DP25 149 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 PYGMP11217 842 aa2.82□□□□□ -1.96
PRPF39-206ENST00000554429 FGFR1P11362 822 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms