RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SLC4A11Q8NBS3 891 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 SNX19Q92543 992 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 HEXIM2Q96MH2 286 aaKnown RBP17.24■□□□□ 0.35
SSH1-208ENST00000548522 C6orf106Q9H6K1 298 aaPredicted RBP17.24■□□□□ 0.35
SSH1-208ENST00000548522 TRAF3IP3Q9Y228 551 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 ZNF510Q9Y2H8 683 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 RAXQ9Y2V3 346 aa17.24■□□□□ 0.35
SSH1-208ENST00000548522 MUC22E2RYF6 1773 aaPredicted RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 ACACAQ13085 2346 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 TSPAN3O60637 253 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 TRIM21P19474 475 aaKnown RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 HOXD9P28356 352 aaPredicted RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 ACSL1P33121 698 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 MATKP42679 507 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 CSNK1EP49674 416 aaKnown RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 RAD23BP54727 409 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 YWHAGP61981 247 aaKnown RBP eCLIP17.23■□□□□ 0.35
SSH1-208ENST00000548522 EIF4HQ15056 248 aaKnown RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 RAB41Q5JT25 222 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 RSRC2Q7L4I2 434 aaKnown RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 FAM217AQ8IXS0 508 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 FAM186BQ8IYM0 893 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 DDI1Q8WTU0 396 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 CYB5D2Q8WUJ1 264 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 UCMAQ8WVF2 138 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 EEF2KMTQ96G04 330 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 CDK5RAP1Q96SZ6 601 aaKnown RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 DCLK3Q9C098 648 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 CCDC86Q9H6F5 360 aaKnown RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 APOBEC2Q9Y235 224 aaKnown RBP17.23■□□□□ 0.35
SSH1-208ENST00000548522 PLXNB3Q9ULL4 1909 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 CKAP5Q14008 2032 aa17.23■□□□□ 0.35
SSH1-208ENST00000548522 BPTFQ12830 3046 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 GCN1Q92616 2671 aaKnown RBP17.22■□□□□ 0.35
SSH1-208ENST00000548522 GOLGA8CPA6NN73 597 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 NPC1O15118 1278 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 MAPK13O15264 365 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 CER1O95813 267 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 ACADMP11310 421 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 HLA-FP30511 346 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 OXTRP30559 389 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 SGSHP51688 502 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 ZNF132P52740 706 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 KIF19Q2TAC6 998 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 SKOR2Q2VWA4 1001 aaPredicted RBP17.22■□□□□ 0.35
SSH1-208ENST00000548522 INTS8Q75QN2 995 aaKnown RBP17.22■□□□□ 0.35
SSH1-208ENST00000548522 PDZD3Q86UT5 571 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 ZC3H3Q8IXZ2 948 aaKnown RBP17.22■□□□□ 0.35
SSH1-208ENST00000548522 CPXM2Q8N436 756 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 NUP58Q9BVL2 599 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 ULBP1Q9BZM6 244 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 CISHQ9NSE2 258 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 RCOR1Q9UKL0 485 aa17.22■□□□□ 0.35
SSH1-208ENST00000548522 ADAMTS20P59510 1910 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 NUMA1Q14980 2115 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 KCNK3O14649 394 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 CYBBP04839 570 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 ZNF883P0CG24 379 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 TKTL1P51854 596 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 CAMK2GQ13555 558 aaPredicted RBP17.21■□□□□ 0.35
SSH1-208ENST00000548522 GSE1Q14687 1217 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 SOWAHCQ53LP3 525 aaPredicted RBP17.21■□□□□ 0.35
SSH1-208ENST00000548522 FMNL3Q8IVF7 1028 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 OR2T3Q8NH03 318 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 LHX5Q9H2C1 402 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 STRIP2Q9ULQ0 834 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.21■□□□□ 0.35
SSH1-208ENST00000548522 HPSEQ9Y251 543 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.21■□□□□ 0.35
SSH1-208ENST00000548522 SNX11Q9Y5W9 270 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 KNL1Q8NG31 2342 aa17.21■□□□□ 0.35
SSH1-208ENST00000548522 MSI1O43347 362 aaKnown RBP17.2■□□□□ 0.34
SSH1-208ENST00000548522 DKK1O94907 266 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 KRT13P13646 458 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 TRIP4Q15650 581 aaPredicted RBP17.2■□□□□ 0.34
SSH1-208ENST00000548522 NFIL3Q16649 462 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 PTPRNQ16849 979 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 GOLGA7BQ2TAP0 167 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 ZCWPW2Q504Y3 356 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 FNDC3BQ53EP0 1204 aaKnown RBP17.2■□□□□ 0.34
SSH1-208ENST00000548522 KCNT1Q5JUK3 1230 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 ARHGAP17Q68EM7 881 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 WFDC5Q8TCV5 224 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 RHBDD1Q8TEB9 315 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 HNRNPLLQ8WVV9 542 aaKnown RBP17.2■□□□□ 0.34
SSH1-208ENST00000548522 EDEM1Q92611 657 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 TATDN2Q93075 761 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 PLD4Q96BZ4 506 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 TMEM176AQ96HP8 235 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 TMEM245Q9H330 911 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 ABCB8Q9NUT2 735 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 SFMBT1Q9UHJ3 866 aa17.2■□□□□ 0.34
SSH1-208ENST00000548522 FAM149AA5PLN7 773 aa17.19■□□□□ 0.34
SSH1-208ENST00000548522 FLRT2O43155 660 aa17.19■□□□□ 0.34
SSH1-208ENST00000548522 ZBED1O96006 694 aa17.19■□□□□ 0.34
SSH1-208ENST00000548522 PSMC2P35998 433 aaKnown RBP17.19■□□□□ 0.34
SSH1-208ENST00000548522 MXI1P50539 228 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms