RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 SFNP31947 248 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 NPTX2P47972 431 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 GCLMP48507 274 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 IFNAR2P48551 515 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 GTF2A2P52657 109 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 OSTNP61366 133 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 AP2B1P63010 937 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 TNNC1P63316 161 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 DMP1Q13316 513 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-208ENST00000545807 PDK3Q15120 406 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 ARHGAP44Q17R89 818 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 SLX4IPQ5VYV7 408 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 ARMCX2Q7L311 632 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 KCTD20Q7Z5Y7 419 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 GPR141Q7Z602 305 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 RALGPS2Q86X27 583 aaPredicted RBP6.9□□□□□ -1.31
NECAP1-208ENST00000545807 STMN2Q93045 179 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 KLC2Q9H0B6 622 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 ABCG4Q9H172 646 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 CYP26B1Q9NR63 512 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 AGPAT3Q9NRZ7 376 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.31
NECAP1-208ENST00000545807 ASIC3Q9UHC3 531 aa6.9□□□□□ -1.31
NECAP1-208ENST00000545807 OTOFQ9HC10 1997 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 C15orf38-AP3S2A0A0A6YYH1 394 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 H7C0C1 242 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PKLRP30613 574 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 NUDT1P36639 197 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CDR2Q01850 454 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 FOLH1Q04609 750 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 KCNMA1Q12791 1236 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CETN1Q12798 172 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PTK2BQ14289 1009 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CCNJQ5T5M9 372 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PPP4R4Q6NUP7 873 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 ABHD15Q6UXT9 468 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 NIPA1Q7RTP0 329 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 ARPINQ7Z6K5 226 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 ZBTB33Q86T24 672 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 C4orf19Q8IY42 314 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 MARVELD2Q8N4S9 558 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 DTX3LQ8TDB6 740 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 ADAMTS16Q8TE57 1224 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 ZBTB45Q96K62 511 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CEP19Q96LK0 163 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 RBM14Q96PK6 669 aaKnown RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 FIZ1Q96SL8 496 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 COQ7Q99807 217 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TDRD1Q9BXT4 1180 aaKnown RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TRPV6Q9H1D0 765 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 XPNPEP1Q9NQW7 623 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TOPORSQ9NS56 1045 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 SEPT11Q9NVA2 429 aaKnown RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 IGSF9Q9P2J2 1179 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CDH7Q9ULB5 785 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CAPN11Q9UMQ6 739 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PTPRFP10586 1907 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 ADGRA3Q8IWK6 1321 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PAPPA2Q9BXP8 1791 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CCDC160A6NGH7 325 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 H3BUI4 141 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TK2O00142 265 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 DCTN3O75935 186 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PLS3P13797 630 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PON1P27169 355 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CXCR5P32302 372 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PSMC2P35998 433 aaKnown RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PPP1R2P41236 205 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 ACOT2P49753 483 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 EMC2Q15006 297 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PSMD6Q15008 389 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 LEXMQ3ZCV2 418 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PPP6R3Q5H9R7 873 aaPredicted RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 METTL11BQ5VVY1 283 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TICAM1Q8IUC6 712 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CBWD2Q8IUF1 395 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 DNERQ8NFT8 737 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 AFG1LQ8WV93 481 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 POMGNT1Q8WZA1 660 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TP53INP1Q96A56 240 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 NLRP4Q96MN2 994 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 BTBD9Q96Q07 612 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 PCYT2Q99447 389 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 CCDC77Q9BR77 488 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TMEM206Q9H813 350 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 WDR6Q9NNW5 1121 aaKnown RBP6.89□□□□□ -1.31
NECAP1-208ENST00000545807 STARD13Q9Y3M8 1113 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
NECAP1-208ENST00000545807 TRIM64A6NGJ6 449 aa6.88□□□□□ -1.31
NECAP1-208ENST00000545807 TRIM64BA6NI03 449 aa6.88□□□□□ -1.31
NECAP1-208ENST00000545807 LRRC72A6NJI9 287 aa6.88□□□□□ -1.31
NECAP1-208ENST00000545807 MIF4GDA9UHW6 222 aaKnown RBP6.88□□□□□ -1.31
NECAP1-208ENST00000545807 PDXKO00764 312 aa6.88□□□□□ -1.31
NECAP1-208ENST00000545807 SLC9A3R1O14745 358 aaPredicted RBP6.88□□□□□ -1.31
NECAP1-208ENST00000545807 TLR2O60603 784 aa6.88□□□□□ -1.31
NECAP1-208ENST00000545807 SLC25A27O95847 323 aa6.88□□□□□ -1.31
NECAP1-208ENST00000545807 PTGS2P35354 604 aa6.88□□□□□ -1.31
NECAP1-208ENST00000545807 EIF4A3P38919 411 aaKnown RBP6.88□□□□□ -1.31
NECAP1-208ENST00000545807 CLCN3P51790 818 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms