RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 OSGEPQ9NPF4 335 aa20.9■□□□□ 0.94
LPCAT3-211ENST00000543794 SERTAD1Q9UHV2 236 aa20.9■□□□□ 0.94
LPCAT3-211ENST00000543794 STRIP2Q9ULQ0 834 aa20.9■□□□□ 0.94
LPCAT3-211ENST00000543794 SLCO1B1Q9Y6L6 691 aa20.9■□□□□ 0.94
LPCAT3-211ENST00000543794 URB1O60287 2271 aaKnown RBP20.9■□□□□ 0.94
LPCAT3-211ENST00000543794 CABIN1Q9Y6J0 2220 aa20.9■□□□□ 0.94
LPCAT3-211ENST00000543794 SLC12A8A0AV02 714 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 PDIA4P13667 645 aaKnown RBP20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 ACSL1P33121 698 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 ME1P48163 572 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 GCLMP48507 274 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 PPP3CAQ08209 521 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 RAB41Q5JT25 222 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 CACUL1Q86Y37 369 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 HEXIM2Q96MH2 286 aaKnown RBP20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 C6orf106Q9H6K1 298 aaPredicted RBP20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 TRAF3IP3Q9Y228 551 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 BTBD3Q9Y2F9 522 aa20.89■□□□□ 0.93
LPCAT3-211ENST00000543794 TRABD2BA6NFA1 517 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 ACTN4O43707 911 aaKnown RBP20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 HLA-EP13747 358 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 ARID5AQ03989 594 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 CAMK2BQ13554 666 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 GALNT15Q8N3T1 639 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 PLD4Q96BZ4 506 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 LHX5Q9H2C1 402 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 TMEM245Q9H330 911 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 SNX11Q9Y5W9 270 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 ASXL3Q9C0F0 2248 aa20.88■□□□□ 0.93
LPCAT3-211ENST00000543794 IGSF10Q6WRI0 2623 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 K7ELQ4 463 aaPredicted RBP20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 TNFSF14O43557 240 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 CALUO43852 315 aaPredicted RBP20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 TRIM49P0CI25 452 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 TRIM49CP0CI26 452 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 YWHAGP61981 247 aaKnown RBP eCLIP20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 ENPEPQ07075 957 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 CYP4F3Q08477 520 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 PDE4CQ08493 712 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 TEAD4Q15561 434 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 TRIP4Q15650 581 aaPredicted RBP20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 PTPRNQ16849 979 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 MPPE1Q53F39 396 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 ZNF394Q53GI3 561 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 PM20D1Q6GTS8 502 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 INTS8Q75QN2 995 aaKnown RBP20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 RSRC2Q7L4I2 434 aaKnown RBP20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 PIGZQ86VD9 579 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 MARCH9Q86YJ5 346 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 SNX19Q92543 992 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 LRIG1Q96JA1 1093 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 TM9SF3Q9HD45 589 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 PLA2G4CQ9UP65 541 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 ANKRD6Q9Y2G4 727 aa20.87■□□□□ 0.93
LPCAT3-211ENST00000543794 PTPRBP23467 1997 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 GOLGA8CPA6NN73 597 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 HOXD9P28356 352 aaPredicted RBP20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 HLA-FP30511 346 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 GRIA4P48058 902 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 NFIL3Q16649 462 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 FOXD4L6Q3SYB3 417 aaPredicted RBP20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 FOXD4L5Q5VV16 416 aaPredicted RBP20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 FOXD4L3Q6VB84 417 aaPredicted RBP20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 CCDC150Q8NCX0 1101 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 FOXD4L4Q8WXT5 416 aaPredicted RBP20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 IGSF8Q969P0 613 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 FAXDC2Q96IV6 333 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 BBC3Q96PG8 261 aaPredicted RBP20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 ARID3AQ99856 593 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 CKAP5Q14008 2032 aa20.86■□□□□ 0.93
LPCAT3-211ENST00000543794 GOLGA4Q13439 2230 aaKnown RBP20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 PCDHGA12O60330 932 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 TSPAN3O60637 253 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 GRK6P43250 576 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 MCCD1P59942 119 aaPredicted RBP20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 ZBTB16Q05516 673 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 SMAD1Q15797 465 aaKnown RBP20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 ARHGAP17Q68EM7 881 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 ATL3Q6DD88 541 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 KIAA0907Q7Z7F0 614 aaPredicted RBP20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 TTC39CQ8N584 583 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 ANKRD52Q8NB46 1076 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 SLC4A11Q8NBS3 891 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 WFIKKN2Q8TEU8 576 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 CYB5D2Q8WUJ1 264 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 BIRC7Q96CA5 298 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 TMEM176AQ96HP8 235 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 BTBD1Q9H0C5 482 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 FBRSQ9HAH7 460 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 TMEM8AQ9HCN3 771 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 STOML2Q9UJZ1 356 aa20.85■□□□□ 0.93
LPCAT3-211ENST00000543794 A0A087WV48 116 aa20.84■□□□□ 0.93
LPCAT3-211ENST00000543794 KCNK3O14649 394 aa20.84■□□□□ 0.93
LPCAT3-211ENST00000543794 SEMA4FO95754 770 aa20.84■□□□□ 0.93
LPCAT3-211ENST00000543794 ZBED1O96006 694 aa20.84■□□□□ 0.93
LPCAT3-211ENST00000543794 MYL1P05976 194 aa20.84■□□□□ 0.93
LPCAT3-211ENST00000543794 KRT13P13646 458 aa20.84■□□□□ 0.93
LPCAT3-211ENST00000543794 NR2F2P24468 414 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms