RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 KRT38O76015 456 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 BAIAP3O94812 1187 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 CD4P01730 458 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 CKMT1AP12532 417 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 MTHFSP49914 203 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 CLNS1AP54105 237 aaKnown RBP4.73□□□□□ -1.65
SNHG1-217ENST00000541578 LOXL3P58215 753 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 CUL4BQ13620 913 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 KCNAB1Q14722 419 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 TRIM71Q2Q1W2 868 aaKnown RBP4.73□□□□□ -1.65
SNHG1-217ENST00000541578 P3H1Q32P28 736 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 COLEC12Q5KU26 742 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 ICE2Q659A1 982 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 KIAA0408Q6ZU52 694 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 RRAGAQ7L523 313 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 GAS2L3Q86XJ1 694 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 RASAL3Q86YV0 1011 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 TMTC1Q8IUR5 882 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 SLC44A2Q8IWA5 706 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-217ENST00000541578 FAM109AQ8N4B1 249 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.73□□□□□ -1.652e-11■■■■■ 59.4
SNHG1-217ENST00000541578 CEP70Q8NHQ1 597 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 ABHD5Q8WTS1 349 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 ATRIPQ8WXE1 791 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 CPT1BQ92523 772 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 SARAFQ96BY9 339 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 ZBTB10Q96DT7 871 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 EIF3CQ99613 913 aaKnown RBP4.73□□□□□ -1.65
SNHG1-217ENST00000541578 GDF15Q99988 308 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 DKK3Q9UBP4 350 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 RGS17Q9UGC6 210 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-217ENST00000541578 ABCA8O94911 1581 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 TTC37Q6PGP7 1564 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 CTTNBP2Q8WZ74 1663 aa4.73□□□□□ -1.65
SNHG1-217ENST00000541578 PNMA6EA0A0J9YXQ4 647 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 DCLK1O15075 740 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 PPM1DO15297 605 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 ZNF134P52741 427 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 PRKAA2P54646 552 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 LILRA4P59901 499 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 VAMP2P63027 116 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 EFR3AQ14156 821 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 ANKRD1Q15327 319 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 TOMM20Q15388 145 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 TEDDM1Q5T9Z0 273 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 CCDC30Q5VVM6 783 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 ITPRIPL1Q6GPH6 555 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 C1orf122Q6ZSJ8 110 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 ZNF551Q7Z340 670 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-217ENST00000541578 DTX2Q86UW9 622 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 BPIFB1Q8TDL5 484 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 PPP2R3CQ969Q6 453 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 RILPL2Q969X0 211 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 HVCN1Q96D96 273 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 PTDSS2Q9BVG9 487 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 PABPC3Q9H361 631 aaKnown RBP4.72□□□□□ -1.65
SNHG1-217ENST00000541578 TP63Q9H3D4 680 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-217ENST00000541578 ARHGEF3Q9NR81 526 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 OLA1Q9NTK5 396 aaKnown RBP4.72□□□□□ -1.65
SNHG1-217ENST00000541578 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 GGA3Q9NZ52 723 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 C19orf53Q9UNZ5 99 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-217ENST00000541578 DTNAQ9Y4J8 743 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 CDY1Q9Y6F8 540 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 WNT6Q9Y6F9 365 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 ATP10AO60312 1499 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 ATP10BO94823 1461 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 RICTORQ6R327 1708 aa4.72□□□□□ -1.65
SNHG1-217ENST00000541578 A0A087WZ62 844 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 ANKRD18BA2A2Z9 1011 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 J3KTA2 159 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 ZNF500O60304 480 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-217ENST00000541578 RBMXL2O75526 392 aaKnown RBP4.71□□□□□ -1.66
SNHG1-217ENST00000541578 NXPH3O95157 252 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 TK1P04183 234 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 PDHA1P08559 390 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 EBLN1P0CF75 366 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 NDUFB7P17568 137 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 MST1P26927 711 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 ITPKBP27987 946 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 LIFRP42702 1097 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 RXRGP48443 463 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 CCT8P50990 548 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 RBM5P52756 815 aaKnown RBP eCLIP4.71□□□□□ -1.66
SNHG1-217ENST00000541578 EIF2B5Q13144 721 aaKnown RBP4.71□□□□□ -1.66
SNHG1-217ENST00000541578 PRKG2Q13237 762 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 CSHL1Q14406 222 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 ZNF569Q5MCW4 686 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 ZNF618Q5T7W0 954 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 FCRL6Q6DN72 434 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 ZNF280DQ6N043 979 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 NFRKBQ6P4R8 1299 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 CFAP161Q6P656 301 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 KCTD20Q7Z5Y7 419 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-217ENST00000541578 AMIGO2Q86SJ2 522 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 RSC1A1Q92681 617 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 HTRA1Q92743 480 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 SDCCAG3Q96C92 435 aa4.71□□□□□ -1.66
SNHG1-217ENST00000541578 MESP1Q9BRJ9 268 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms