RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TFDP3Q5H9I0 405 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 MFSD7Q6UXD7 560 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 CELF4Q9BZC1 486 aaKnown RBP15.72■□□□□ 0.11
HMGA2-210ENST00000541363 A1CFQ9NQ94 594 aaKnown RBP15.72■□□□□ 0.11
HMGA2-210ENST00000541363 WHRNQ9P202 907 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 PCDH8O95206 1070 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 GH1P01241 217 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 MTAPQ13126 283 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 MTM1Q13496 603 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 RAB25P57735 213 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 FAM117BQ6P1L5 589 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 EXOC3L1Q86VI1 746 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 ZNF483Q8TF39 744 aaPredicted RBP15.72■□□□□ 0.11
HMGA2-210ENST00000541363 RPRD1AQ96P16 312 aaPredicted RBP15.72■□□□□ 0.11
HMGA2-210ENST00000541363 EVA1BQ9NVM1 165 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 EPN2O95208 641 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 OXCT1P55809 520 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 KCTD21Q4G0X4 260 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 PRR5LQ6MZQ0 368 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 LRRC34Q8IZ02 419 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 SKA1Q96BD8 255 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 REEP1Q9H902 201 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 MAPRE3Q9UPY8 281 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 LAMC3Q9Y6N6 1575 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 PSMD11O00231 422 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 SEMA3DO95025 777 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 TRMT11Q7Z4G4 463 aaKnown RBP15.72■□□□□ 0.11
HMGA2-210ENST00000541363 TEKT5Q96M29 485 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 COLEC11Q9BWP8 271 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
HMGA2-210ENST00000541363 AP3M1Q9Y2T2 418 aa15.72■□□□□ 0.11
HMGA2-210ENST00000541363 KDM5DQ9BY66 1539 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 MBL2P11226 248 aaPredicted RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 FAUP35544 74 aaKnown RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 AMPD2Q01433 879 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 RUNDC3AQ59EK9 446 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 CXXC5Q7LFL8 322 aaKnown RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 RSPH9Q9H1X1 276 aaPredicted RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 GPAMQ9HCL2 828 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 CROTQ9UKG9 612 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 CACNB3P54284 484 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 C5orf22Q49AR2 442 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 DAW1Q8N136 415 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 OR6Y1Q8NGX8 325 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 RHOBTB2Q9BYZ6 727 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 LY9Q9HBG7 655 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 RXFP1Q9HBX9 757 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 CRYL1Q9Y2S2 319 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 PLOD3O60568 738 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 SLC1A6P48664 564 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 TMEM62Q0P6H9 643 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 ADHFE1Q8IWW8 467 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 COX4I2Q96KJ9 171 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 SLC38A2Q96QD8 506 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 TOR4AQ9NXH8 423 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 SPP2Q13103 211 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 CLEC4GQ6UXB4 293 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 ATG14Q6ZNE5 492 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 FNIP1Q8TF40 1166 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 HAT1O14929 419 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 MAGEB3O15480 346 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 PGK1P00558 417 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 ATP5F1P24539 256 aaPredicted RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 GALNT3Q14435 633 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 PDK2Q15119 407 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 KDM7AQ6ZMT4 941 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 MTDHQ86UE4 582 aaKnown RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 ITFG1Q8TB96 612 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 DGCR6LQ9BY27 220 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 EPB41L1Q9H4G0 881 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 FBXO28Q9NVF7 368 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 DDIT4Q9NX09 232 aa15.71■□□□□ 0.11
HMGA2-210ENST00000541363 WBP11Q9Y2W2 641 aaKnown RBP15.71■□□□□ 0.11
HMGA2-210ENST00000541363 A0A087WXM4 84 aa15.71■□□□□ 0.1
HMGA2-210ENST00000541363 GARTP22102 1010 aa15.71■□□□□ 0.1
HMGA2-210ENST00000541363 NAIF1Q69YI7 327 aaPredicted RBP15.71■□□□□ 0.1
HMGA2-210ENST00000541363 RNF145Q96MT1 663 aa15.71■□□□□ 0.1
HMGA2-210ENST00000541363 QTRT2Q9H974 415 aaKnown RBP15.71■□□□□ 0.1
HMGA2-210ENST00000541363 NPC1L1Q9UHC9 1359 aa15.71■□□□□ 0.1
HMGA2-210ENST00000541363 LARGE1O95461 756 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 PTPN4P29074 926 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 ILF2Q12905 390 aaKnown RBP15.7■□□□□ 0.1
HMGA2-210ENST00000541363 FASTKQ14296 549 aaKnown RBP15.7■□□□□ 0.1
HMGA2-210ENST00000541363 PDIA5Q14554 519 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 TCHHL1Q5QJ38 904 aaPredicted RBP15.7■□□□□ 0.1
HMGA2-210ENST00000541363 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 CDK5RAP1Q96SZ6 601 aaKnown RBP15.7■□□□□ 0.1
HMGA2-210ENST00000541363 GIT1Q9Y2X7 761 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 ZNF432O94892 652 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 SRGNP10124 158 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 PRKAA2P54646 552 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 STK32CQ86UX6 486 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 FAM136AQ96C01 138 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 CES2O00748 559 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 BOLA3Q53S33 107 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 OXER1Q8TDS5 423 aa15.7■□□□□ 0.1
HMGA2-210ENST00000541363 TDRD3Q9H7E2 651 aaKnown RBP15.7■□□□□ 0.1
HMGA2-210ENST00000541363 PLA2G4CQ9UP65 541 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms