RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SPEGQ15772 3267 aa4.1□□□□□ -1.75
AC055720.1-201ENST00000539552 USP24Q9UPU5 2620 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PATE3B3GLJ2 98 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ELL2O00472 640 aaPredicted RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 SH2B2O14492 632 aaPredicted RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PSMA7O14818 248 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PIP5K1BO14986 540 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ASNA1O43681 348 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 B4GALT4O60513 344 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 CSPG5O95196 566 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 CHGBP05060 677 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 CLEC3BP05452 202 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 LAG3P18627 525 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 TBXAS1P24557 533 aaPredicted RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ABCD3P28288 659 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 EEF1DP29692 281 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PRPHP41219 470 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 RGS2P41220 211 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 AARSP49588 968 aaKnown RBP eCLIP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 MCM2P49736 904 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ZNF41P51814 821 aaPredicted RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PNLIPRP1P54315 467 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PRKAA2P54646 552 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 POLR2FP61218 127 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 AKAP17AQ02040 695 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 GRIN1Q05586 938 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 MRPL28Q13084 256 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PRPF4BQ13523 1007 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 CUL4BQ13620 913 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ADRM1Q16186 407 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 BAK1Q16611 211 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ANKDD1AQ495B1 522 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 HSP90B2PQ58FF3 399 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ZBTB41Q5SVQ8 909 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ATPAF1Q5TC12 328 aaPredicted RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ATG16L1Q676U5 607 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 DPY19L2P1Q6NXN4 242 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 C16orf87Q6PH81 154 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 IYDQ6PHW0 289 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 DCLRE1AQ6PJP8 1040 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC22A25Q6T423 547 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 KDELC1Q6UW63 502 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 RALYLQ86SE5 291 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 RBM12BQ8IXT5 1001 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 KBTBD2Q8IY47 623 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 AMER2Q8N7J2 671 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 FBXO30Q8TB52 745 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 BICD2Q8TD16 824 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 BRIX1Q8TDN6 353 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PIGOQ8TEQ8 1089 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ZNF384Q8TF68 577 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 TBC1D5Q92609 795 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 SNX22Q96L94 193 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 UIMC1Q96RL1 719 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 UHRF1Q96T88 793 aaPredicted RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ACAT2Q9BWD1 397 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 IKZF4Q9H2S9 585 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 MTG2Q9H4K7 406 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 BARX1Q9HBU1 254 aaPredicted RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 INCENPQ9NQS7 918 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 RBM12Q9NTZ6 932 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 DKK3Q9UBP4 350 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 FTSJ1Q9UET6 329 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 FBXL5Q9UKA1 691 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ZFR2Q9UPR6 939 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PAXBP1Q9Y5B6 917 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 PLEKHG2Q9H7P9 1386 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 ZFYVE9O95405 1425 aa4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 RRBP1Q9P2E9 1410 aaKnown RBP4.09□□□□□ -1.75
AC055720.1-201ENST00000539552 CRYBG1Q9Y4K1 1723 aa4.09□□□□□ -1.76
AC055720.1-201ENST00000539552 H3BNC9 293 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 TECPR2O15040 1411 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 VILLO15195 856 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 SGSM2O43147 1006 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 SOCS5O75159 536 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 ACTL6BO94805 426 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 TPPPO94811 219 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 PRLP01236 227 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 AFPP02771 609 aaKnown RBP4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 PFKMP08237 780 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 CNPP09543 421 aaKnown RBP4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 PCP11498 1178 aaKnown RBP4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 TYRP14679 529 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 PTGS1P23219 599 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 MAPK3P27361 379 aaPredicted RBP4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 APEX1P27695 318 aaKnown RBP4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 HSPA4P34932 840 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 THPOP40225 353 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 DPP6P42658 865 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 MCAMP43121 646 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 ITGA1P56199 1179 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 RPS16P62249 146 aaKnown RBP4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 PTH1RQ03431 593 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 NFATC3Q12968 1075 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 SLC14A1Q13336 389 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 MYBPC3Q14896 1274 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 CSRP2Q16527 193 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 MAN2A1Q16706 1144 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 C2orf76Q3KRA6 126 aa4.08□□□□□ -1.76
AC055720.1-201ENST00000539552 LSM12Q3MHD2 195 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms