RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 NFIL3Q16649 462 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 RAB41Q5JT25 222 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 SERPINA13PQ6UXR4 307 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 DBX2Q6ZNG2 339 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 FAM124AQ86V42 546 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 PIGZQ86VD9 579 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 FAM217AQ8IXS0 508 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 FAM186BQ8IYM0 893 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 USP25Q9UHP3 1055 aa22.32■■□□□ 1.16
SSH3-211ENST00000534112 APC2O95996 2303 aa22.31■■□□□ 1.16
SSH3-211ENST00000534112 ACACAQ13085 2346 aa22.31■■□□□ 1.16
SSH3-211ENST00000534112 A0A1B0GVL5 298 aa22.31■■□□□ 1.16
SSH3-211ENST00000534112 YWHAGP61981 247 aaKnown RBP eCLIP22.31■■□□□ 1.16
SSH3-211ENST00000534112 ARID5AQ03989 594 aa22.31■■□□□ 1.16
SSH3-211ENST00000534112 PCED1AQ9H1Q7 454 aa22.31■■□□□ 1.16
SSH3-211ENST00000534112 TMEM8AQ9HCN3 771 aa22.31■■□□□ 1.16
SSH3-211ENST00000534112 PCDHGB2Q9Y5G2 931 aa22.31■■□□□ 1.16
SSH3-211ENST00000534112 A0A1B0GVT2 93 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 HLA-EP13747 358 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 PFKFB1P16118 471 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 PSMC2P35998 433 aaKnown RBP22.3■■□□□ 1.16
SSH3-211ENST00000534112 CSNK1EP49674 416 aaKnown RBP22.3■■□□□ 1.16
SSH3-211ENST00000534112 ANKRD52Q8NB46 1076 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 SLC4A11Q8NBS3 891 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 OR2T3Q8NH03 318 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 BAHD1Q8TBE0 780 aaPredicted RBP22.3■■□□□ 1.16
SSH3-211ENST00000534112 MDM1Q8TC05 714 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 RHBDD1Q8TEB9 315 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 SEMA4DQ92854 862 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 PLD4Q96BZ4 506 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 TMEM176AQ96HP8 235 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 CDC6Q99741 560 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 ARID3AQ99856 593 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 CISHQ9NSE2 258 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 TOR4AQ9NXH8 423 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 MAPK8IP1Q9UQF2 711 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 SLCO1B1Q9Y6L6 691 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 LOC400499M0QZD8 3231 aa22.3■■□□□ 1.16
SSH3-211ENST00000534112 SMG1Q96Q15 3661 aaKnown RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 ATXN1LP0C7T5 689 aaKnown RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 CMA1P23946 247 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 RPL13P26373 211 aaKnown RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 HOXD9P28356 352 aaPredicted RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 GTF2H1P32780 548 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 AFF3P51826 1226 aaKnown RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 TKTL1P51854 596 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 RAD23BP54727 409 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 ADAM9Q13443 819 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 CAMK2GQ13555 558 aaPredicted RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 TRIP4Q15650 581 aaPredicted RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 ARHGAP17Q68EM7 881 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 KRT39Q6A163 491 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 PM20D1Q6GTS8 502 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 TMPRSS7Q7RTY8 843 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 TTC39CQ8N584 583 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 SNX19Q92543 992 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 NDRG1Q92597 394 aaKnown RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 SNX21Q969T3 373 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 FAXDC2Q96IV6 333 aa22.29■■□□□ 1.16
SSH3-211ENST00000534112 C6orf106Q9H6K1 298 aaPredicted RBP22.29■■□□□ 1.16
SSH3-211ENST00000534112 FLRT2O43155 660 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 DKK1O94907 266 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 RHOBTB3O94955 611 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 ZBED1O96006 694 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 HLA-FP30511 346 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 ACSL1P33121 698 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 HARS2P49590 506 aaKnown RBP22.28■■□□□ 1.16
SSH3-211ENST00000534112 SLC8A3P57103 927 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 PKP1Q13835 747 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 KIF19Q2TAC6 998 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 COL28A1Q2UY09 1125 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 MPPE1Q53F39 396 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 PDZD3Q86UT5 571 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 ULBP1Q9BZM6 244 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 LHX5Q9H2C1 402 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 TMEM245Q9H330 911 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 PLA2G4CQ9UP65 541 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 HPSEQ9Y251 543 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.28■■□□□ 1.16
SSH3-211ENST00000534112 CABIN1Q9Y6J0 2220 aa22.28■■□□□ 1.16
SSH3-211ENST00000534112 TSPAN3O60637 253 aa22.27■■□□□ 1.16
SSH3-211ENST00000534112 C7P10643 843 aa22.27■■□□□ 1.16
SSH3-211ENST00000534112 MCCD1P59942 119 aaPredicted RBP22.27■■□□□ 1.16
SSH3-211ENST00000534112 SUZ12Q15022 739 aaKnown RBP22.27■■□□□ 1.16
SSH3-211ENST00000534112 FNDC3BQ53EP0 1204 aaKnown RBP22.27■■□□□ 1.16
SSH3-211ENST00000534112 BHLHA9Q7RTU4 235 aa22.27■■□□□ 1.16
SSH3-211ENST00000534112 FMNL3Q8IVF7 1028 aa22.27■■□□□ 1.16
SSH3-211ENST00000534112 CYB5D2Q8WUJ1 264 aa22.27■■□□□ 1.16
SSH3-211ENST00000534112 CCDC47Q96A33 483 aaKnown RBP22.27■■□□□ 1.16
SSH3-211ENST00000534112 BTBD3Q9Y2F9 522 aa22.27■■□□□ 1.16
SSH3-211ENST00000534112 RAXQ9Y2V3 346 aa22.27■■□□□ 1.16
SSH3-211ENST00000534112 TULP2O00295 520 aa22.26■■□□□ 1.15
SSH3-211ENST00000534112 PRR29P0C7W0 189 aa22.26■■□□□ 1.15
SSH3-211ENST00000534112 GUF1Q8N442 669 aaKnown RBP22.26■■□□□ 1.15
SSH3-211ENST00000534112 ZNF366Q8N895 744 aa22.26■■□□□ 1.15
SSH3-211ENST00000534112 FBXL13Q8NEE6 735 aa22.26■■□□□ 1.15
SSH3-211ENST00000534112 WFIKKN2Q8TEU8 576 aa22.26■■□□□ 1.15
SSH3-211ENST00000534112 TATDN2Q93075 761 aa22.26■■□□□ 1.15
SSH3-211ENST00000534112 TMA16Q96EY4 203 aaKnown RBP22.26■■□□□ 1.15
SSH3-211ENST00000534112 OSGEPQ9NPF4 335 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms