RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 BIRC7Q96CA5 298 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 PIWIL1Q96J94 861 aaKnown RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 TWNKQ96RR1 684 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 HNRNPABQ99729 332 aaKnown RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 C7orf25Q9BPX7 421 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 NT5C1AQ9BXI3 368 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 DNAI2Q9GZS0 605 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 VRTNQ9H8Y1 702 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 MARCH2Q9P0N8 246 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 NCKAP1Q9Y2A7 1128 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-206ENST00000531430 RAI2Q9Y5P3 530 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 LOC400499M0QZD8 3231 aa9.68□□□□□ -0.86
NEDD8-206ENST00000531430 A0A087WV48 116 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 HHLA1C9JL84 531 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 CBX4O00257 560 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 PENKP01210 267 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 HLA-DRAP01903 254 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 ABCB4P21439 1286 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 CD27P26842 260 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 HARS2P49590 506 aaKnown RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 KIF11P52732 1056 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 BCAT1P54687 386 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 DNAJC3Q13217 504 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 CAMK2BQ13554 666 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 SMAD1Q15797 465 aaKnown RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 INAVAQ3KP66 663 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 MPPE1Q53F39 396 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 KCNT1Q5JUK3 1230 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 PPP1R26Q5T8A7 1209 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 TMEM215Q68D42 235 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 KLHDC10Q6PID8 442 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 SV2AQ7L0J3 742 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 TMPRSS12Q86WS5 348 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 EID2Q8N6I1 236 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 C1orf216Q8TAB5 229 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 GOLGA5Q8TBA6 731 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 NDRG1Q92597 394 aaKnown RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 IGSF8Q969P0 613 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 TMA16Q96EY4 203 aaKnown RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 CNDP2Q96KP4 475 aaKnown RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 CDK5RAP1Q96SZ6 601 aaKnown RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 DUSP16Q9BY84 665 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 ACE2Q9BYF1 805 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 IMPG2Q9BZV3 1241 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 CUEDC2Q9H467 287 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 MTG2Q9H4K7 406 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 AASDHPPTQ9NRN7 309 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 CGNQ9P2M7 1197 aaKnown RBP9.67□□□□□ -0.86
NEDD8-206ENST00000531430 DKK4Q9UBT3 224 aa9.67□□□□□ -0.86
NEDD8-206ENST00000531430 UBE4BO95155 1302 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 HELZ2Q9BYK8 2649 aaKnown RBP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 ENC1O14682 589 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 POLR2EP19388 210 aaKnown RBP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 HNF1BP35680 557 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 GRIA4P48058 902 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 YWHAGP61981 247 aaKnown RBP eCLIP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 RPS14P62263 151 aaKnown RBP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 TARDBPQ13148 414 aaKnown RBP eCLIP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 CUL4BQ13620 913 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 ENPP2Q13822 863 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 EIF4HQ15056 248 aaKnown RBP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 E2F4Q16254 413 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 TTC31Q49AM3 519 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 GRAMD1CQ8IYS0 662 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 CCDC150Q8NCX0 1101 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 RNF139Q8WU17 664 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 TAF4BQ92750 862 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 SKA1Q96BD8 255 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 ZNF396Q96N95 335 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-206ENST00000531430 SLC2A11Q9BYW1 496 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 PRSS16Q9NQE7 514 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 ABCB8Q9NUT2 735 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 FBXL12Q9NXK8 326 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 CLIC5Q9NZA1 410 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 STIM2Q9P246 746 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 SUN2Q9UH99 717 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 FRMD4BQ9Y2L6 1034 aa9.66□□□□□ -0.86
NEDD8-206ENST00000531430 CAPN9O14815 690 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 PCDHGA12O60330 932 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 CUTAO60888 179 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 RNASEH1O60930 286 aaKnown RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 DKK1O94907 266 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 ASS1P00966 412 aaKnown RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 IGLV3-19P01714 112 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 ATP5BP06576 529 aaKnown RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 PDIA4P13667 645 aaKnown RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 CTSKP43235 329 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 ASPAP45381 313 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 GCLMP48507 274 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 SLC8A3P57103 927 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 ST8SIA6P61647 398 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 CCDC173Q0VFZ6 552 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 CAMK2GQ13555 558 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-206ENST00000531430 PTPRNQ16849 979 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 ZACNQ401N2 412 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 KMT5BQ4FZB7 885 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 MBLAC2Q68D91 279 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 KIAA0895LQ68EN5 471 aa9.65□□□□□ -0.86
NEDD8-206ENST00000531430 SHC4Q6S5L8 630 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms