RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 MSRAQ9UJ68 235 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 DNPEPQ9ULA0 475 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 KRT6AP02538 564 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 KRT6BP04259 564 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 OR56A5P0C7T3 313 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 SMIM10L2AP0DMW4 78 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 SMIM10L2BP0DMW5 78 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 YWHAQP27348 245 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 GTF2E2P29084 291 aaKnown RBP8.68□□□□□ -1.02
CTNND1-225ENST00000530094 KRT6CP48668 564 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 PEX6Q13608 980 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 C11orf63Q6NUN7 778 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 PRMT9Q6P2P2 845 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 TRPM8Q7Z2W7 1104 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 JADE3Q92613 823 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 VPS33AQ96AX1 596 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 CNDP1Q96KN2 507 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 KRT84Q9NSB2 600 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 AP3M1Q9Y2T2 418 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 TIMM13Q9Y5L4 95 aaPredicted RBP8.68□□□□□ -1.02
CTNND1-225ENST00000530094 SNCAIPQ9Y6H5 919 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 CNTNAP2Q9UHC6 1331 aa8.68□□□□□ -1.02
CTNND1-225ENST00000530094 B2RBV5 119 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 C4BPBP20851 252 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 RRM1P23921 792 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 KRR1Q13601 381 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CCNG2Q16589 344 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MARC1Q5VT66 337 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 BTNL9Q6UXG8 535 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 METTL3Q86U44 580 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 IFNEQ86WN2 208 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 DDX42Q86XP3 938 aaKnown RBP eCLIP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 RIN3Q8TB24 985 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MCOLN3Q8TDD5 553 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 POP1Q99575 1024 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CIPCQ9C0C6 399 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 IGFLR1Q9H665 355 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CISHQ9NSE2 258 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 SPG21Q9NZD8 308 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MAPRE3Q9UPY8 281 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 RIPK3Q9Y572 518 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MEIS2O14770 477 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 GUCY1B2O75343 617 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MTA2O94776 668 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 PCDH8O95206 1070 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ZNF7P17097 686 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 HALP42357 657 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 NAA20P61599 178 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 GNA13Q14344 377 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 APLFQ8IW19 511 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 TMEM237Q96Q45 408 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CCT8L2Q96SF2 557 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 IARS2Q9NSE4 1012 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 PLAGL2Q9UPG8 496 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 AFDNP55196 1824 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 RAD51BO15315 384 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ADCY6O43306 1168 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 RAMP2O60895 175 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CHRNB3Q05901 458 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 GRTP1Q5TC63 336 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 GJB7Q6PEY0 223 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MAGEB18Q96M61 343 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 PANX3Q96QZ0 392 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 VAT1Q99536 393 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 THTPAQ9BU02 230 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ELOVL6Q9H5J4 265 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 BATF3Q9NR55 127 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ADAM30Q9UKF2 790 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 FAM50BQ9Y247 325 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ACOT9Q9Y305 439 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 H3BMM5 538 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CBX4O00257 560 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 PCNAP12004 261 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CRABP2P29373 138 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CYP2C18P33260 490 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ATXN3P54252 364 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ALDH6A1Q02252 535 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 IYDQ6PHW0 289 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ACTRT1Q8TDG2 376 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 SEC16BQ96JE7 1060 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CNBD2Q96M20 576 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ASB2Q96Q27 587 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 SIKE1Q9BRV8 207 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 EPS8L2Q9H6S3 715 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 NCKIPSDQ9NZQ3 722 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MARCOQ9UEW3 520 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 NFASCO94856 1347 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 OPLAHO14841 1288 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 ATP5BP06576 529 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CLK1P49759 484 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CCNG1P51959 295 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 GYS2P54840 703 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 BTKQ06187 659 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 MGAT5Q09328 741 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 CDH17Q12864 832 aa8.67□□□□□ -1.02
CTNND1-225ENST00000530094 USP39Q53GS9 565 aaKnown RBP8.67□□□□□ -1.02
CTNND1-225ENST00000530094 SPANXN3Q5MJ09 141 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms