RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 SPATA4Q8NEY3 305 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SLC20A1Q8WUM9 679 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 TMEM174Q8WUU8 243 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 COPS5Q92905 334 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 USP13Q92995 863 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 EME1Q96AY2 570 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 CCDC126Q96EE4 140 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ZNF668Q96K58 619 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 PI4K2AQ9BTU6 479 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ADNPQ9H2P0 1102 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 IKZF4Q9H2S9 585 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 BCAS3Q9H6U6 928 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SP110Q9HB58 689 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 PARVAQ9NVD7 372 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 COPG2Q9UBF2 871 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 NXF1Q9UBU9 619 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 GGT7Q9UJ14 662 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SPACA6W5XKT8 324 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 LOC285556D6RIA3 1793 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 PAPPA2Q9BXP8 1791 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SF3B1O75533 1304 aaKnown RBP eCLIP2.66□□□□□ -1.985e-7■■■■■ 119.8
PCM1-222ENST00000524226 DDX3XO00571 662 aaKnown RBP eCLIP2.66□□□□□ -1.985e-6■■□□□ 13.2
PCM1-222ENST00000524226 MEFVO15553 781 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 TLR2O60603 784 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 DNAJC6O75061 913 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 KRT14P02533 472 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 MMP3P08254 477 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 INSRRP14616 1297 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 H2AFXP16104 143 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 LAG3P18627 525 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 AVPR1AP37288 418 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SERPINH1P50454 418 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 BCAR1P56945 870 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SF3A3Q12874 501 aaKnown RBP eCLIP2.66□□□□□ -1.981e-6■■□□□ 12.8
PCM1-222ENST00000524226 GPM6BQ13491 265 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 UBXN2BQ14CS0 331 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 CCDC142Q17RM4 750 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ASTE1Q2TB18 679 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 LDLRAD1Q5T700 205 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 NOTUMQ6P988 496 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 LVRNQ6Q4G3 990 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SV2AQ7L0J3 742 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP2.66□□□□□ -1.98
PCM1-222ENST00000524226 SLC47A2Q86VL8 602 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 CCNJLQ8IV13 435 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 CLEC4FQ8N1N0 589 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 USP38Q8NB14 1042 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 DIS3LQ8TF46 1054 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 HNRNPLLQ8WVV9 542 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 AHCYL2Q96HN2 611 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 PRRX2Q99811 253 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SH3GL1Q99961 368 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 AP1M1Q9BXS5 423 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 MTMR12Q9C0I1 747 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ABCG4Q9H172 646 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 SMYD3Q9H7B4 428 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 PLEKHA5Q9HAU0 1116 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 TXNRD2Q9NNW7 524 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 NGRNQ9NPE2 291 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 DMAP1Q9NPF5 467 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 XPNPEP1Q9NQW7 623 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 VTI1BQ9UEU0 232 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ANAPC7Q9UJX3 599 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 AP3M1Q9Y2T2 418 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 PCDHGC5Q9Y5F6 944 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 STON1Q9Y6Q2 735 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 IGKV6D-21A0A0A0MT36 114 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 MAGEA13PA6NCF6 341 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 H0Y3Z8 333 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 INPP4BO15327 924 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 PDE9AO76083 593 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ECDO95905 644 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 ALBP02768 609 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 VTNP04004 478 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ATP5BP06576 529 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 MYBL2P10244 700 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 ADSSP30520 456 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 STAT5AP42229 794 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 GUCA1AP43080 201 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 HNRNPH2P55795 449 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 RBP5P82980 135 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 MMRN1Q13201 1228 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 GRB14Q14449 540 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 MAPRE1Q15691 268 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 RBBP7Q16576 425 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 HIST2H2ACQ16777 129 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 ZNF792Q3KQV3 632 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 MGAT5BQ3V5L5 792 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 USP39Q53GS9 565 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 C2CD6Q53TS8 623 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 TDRD10Q5VZ19 366 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 CDCA2Q69YH5 1023 aaPredicted RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 HIST2H2AA3Q6FI13 130 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 UGT3A1Q6NUS8 523 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 RWDD4Q6NW29 188 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 FGD2Q7Z6J4 655 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 RBM23Q86U06 439 aaKnown RBP2.66□□□□□ -1.98
PCM1-222ENST00000524226 CYP4Z1Q86W10 505 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 DDIASQ8IXT1 998 aa2.66□□□□□ -1.98
PCM1-222ENST00000524226 FAM71AQ8IYT1 594 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms