RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PIGHQ14442 188 aaPredicted RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 MESDQ14696 234 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 PPP2R5DQ14738 602 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 CA9Q16790 459 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 AAK1Q2M2I8 961 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 GAB4Q2WGN9 574 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 FAM133BQ5BKY9 247 aaKnown RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 PIK3R6Q5UE93 754 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 CC2D1AQ6P1N0 951 aaPredicted RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 SLFN11Q7Z7L1 901 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 C14orf80Q86SX3 495 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 BBS7Q8IWZ6 715 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 FAM217AQ8IXS0 508 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 C17orf53Q8N3J3 647 aaPredicted RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 BPIFB1Q8TDL5 484 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 PLD4Q96BZ4 506 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 ACSF2Q96CM8 615 aaPredicted RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 CHFRQ96EP1 664 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 ZFYVE19Q96K21 471 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 FAM83CQ9BQN1 747 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
CLN8-202ENST00000517514 NACA2Q9H009 215 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 KIF9Q9HAQ2 790 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 KCNK12Q9HB15 430 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 ZFP14Q9HCL3 533 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 HPS4Q9NQG7 708 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 PRKAG3Q9UGI9 489 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 IP6K2Q9UHH9 426 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 STOML2Q9UJZ1 356 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 STAP1Q9ULZ2 295 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 NEU3Q9UQ49 428 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 NR2E1Q9Y466 385 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 WNT6Q9Y6F9 365 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 CAPN6Q9Y6Q1 641 aa10.27□□□□□ -0.77
CLN8-202ENST00000517514 MACROD2A1Z1Q3 448 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 TMEM110-MUSTN1A8MSY1 372 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 FAM72CH0Y354 149 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 ACSL4O60488 711 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 PAGE1O75459 146 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 IPO7O95373 1038 aaKnown RBP10.26□□□□□ -0.77
CLN8-202ENST00000517514 F9P00740 461 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 ARSAP15289 507 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 COMTP21964 271 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 MAN1A1P33908 653 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 ADRA1BP35368 520 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 PCK1P35558 622 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 GGCXP38435 758 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 NOP2P46087 812 aaKnown RBP10.26□□□□□ -0.77
CLN8-202ENST00000517514 IRAK1P51617 712 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 SGSHP51688 502 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 SCAPQ12770 1279 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 KIF5AQ12840 1032 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 ACAP1Q15027 740 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 EML3Q32P44 896 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 ATP13A4Q4VNC1 1196 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 IER5LQ5T953 404 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 FAM72AQ5TYM5 149 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 TRIM68Q6AZZ1 485 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 FAM72DQ6L9T8 149 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 C11orf63Q6NUN7 778 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 MTSS1LQ765P7 747 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 FAM72BQ86X60 149 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 DENND1CQ8IV53 801 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 PYROXD2Q8N2H3 581 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 SLC44A3Q8N4M1 653 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 CD101Q93033 1021 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 AZIN2Q96A70 460 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 NECAB3Q96P71 396 aaPredicted RBP10.26□□□□□ -0.77
CLN8-202ENST00000517514 TKTL2Q9H0I9 626 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 LUC7LQ9NQ29 371 aaKnown RBP10.26□□□□□ -0.77
CLN8-202ENST00000517514 LZTFL1Q9NQ48 299 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 KCND1Q9NSA2 647 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLN8-202ENST00000517514 GPATCH2LQ9NWQ4 482 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 TRMT1Q9NXH9 659 aaKnown RBP10.26□□□□□ -0.77
CLN8-202ENST00000517514 FZD10Q9ULW2 581 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 FAM50BQ9Y247 325 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 HS3ST4Q9Y661 456 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 ALG6Q9Y672 507 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 CHD5Q8TDI0 1954 aa10.26□□□□□ -0.77
CLN8-202ENST00000517514 SHISA7A6NL88 538 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 TRDMT1O14717 391 aaKnown RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 NARSO43776 548 aaKnown RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 MOCS2O96007 188 aaPredicted RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 CCR1P32246 355 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 GBP1P32455 592 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 MARCKSL1P49006 195 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 ARSEP51690 589 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 KPNA1P52294 538 aaPredicted RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 VCPP55072 806 aaKnown RBP10.25□□□□□ -0.77
CLN8-202ENST00000517514 TNK2Q07912 1038 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 SEMA3BQ13214 749 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 MS4A13Q5J8X5 152 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 BRMS1LQ5PSV4 323 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 MANEALQ5VSG8 457 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 NUGGCQ68CJ6 796 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 RNF43Q68DV7 783 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 RFWD3Q6PCD5 774 aa10.25□□□□□ -0.77
CLN8-202ENST00000517514 DDX42Q86XP3 938 aaKnown RBP eCLIP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms