RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 SERPINB3P29508 390 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 PSEN1P49768 467 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 LILRA4P59901 499 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 SOX4Q06945 474 aaPredicted RBP11.32□□□□□ -0.6
SEC31A-228ENST00000509142 SLC10A2Q12908 348 aaPredicted RBP11.32□□□□□ -0.6
SEC31A-228ENST00000509142 ANO7Q6IWH7 933 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 RINLQ6ZS11 566 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 DEPDC1BQ8WUY9 529 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 SKA1Q96BD8 255 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 RTP4Q96DX8 246 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 NUDCD1Q96RS6 583 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 PTPN18Q99952 460 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 UGT1A7Q9HAW7 530 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 UGT1A10Q9HAW8 530 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 UGT1A8Q9HAW9 530 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 SMYD2Q9NRG4 433 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 GDAP2Q9NXN4 497 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 LNPEPQ9UIQ6 1025 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 CCDC189A1A4V9 331 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 MBLAC1A4D2B0 266 aaPredicted RBP11.32□□□□□ -0.6
SEC31A-228ENST00000509142 M0QYT0 321 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 BGNP21810 368 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 PTPN4P29074 926 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 PRKD1Q15139 912 aaPredicted RBP11.32□□□□□ -0.6
SEC31A-228ENST00000509142 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 STRADAQ7RTN6 431 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 CAND1Q86VP6 1230 aaKnown RBP11.32□□□□□ -0.6
SEC31A-228ENST00000509142 HTR3CQ8WXA8 447 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 LRRC39Q96DD0 335 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
SEC31A-228ENST00000509142 MECRQ9BV79 373 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 XAB2Q9HCS7 855 aaKnown RBP11.32□□□□□ -0.6
SEC31A-228ENST00000509142 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
SEC31A-228ENST00000509142 MYO18AQ92614 2054 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 H3BRJ5 948 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 XPO1O14980 1071 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 PTDSS1P48651 473 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 RASSF2P50749 326 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 BLMHQ13867 455 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 BMPR2Q13873 1038 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 NETO2Q8NC67 525 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 MCUQ8NE86 351 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 LGMNQ99538 433 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 POPDC2Q9HBU9 364 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 DTLQ9NZJ0 730 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 GJD2Q9UKL4 321 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 PLXNB2O15031 1838 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 I3L4J1 428 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 GCATO75600 419 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 TOMM70O94826 608 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 KCNE1P15382 129 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 PTPN1P18031 435 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 DEUP1Q05D60 604 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 TAF11Q15544 211 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 SLC25A52Q3SY17 297 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 MROH9Q5TGP6 573 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 UNC5AQ6ZN44 842 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 GSDMBQ8TAX9 411 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 ZFP42Q96MM3 310 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 SRPK1Q96SB4 655 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 KATNAL1Q9BW62 490 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 DUSP16Q9BY84 665 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 C20orf27Q9GZN8 174 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 GNEQ9Y223 722 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 TTLL3Q9Y4R7 772 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 TOP3BO95985 862 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 NPR3P17342 541 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 TKTP29401 623 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 SCNN1AP37088 669 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 MAP3K7CLP57077 242 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 SESN2P58004 480 aaPredicted RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 FKBP1BP68106 108 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 SLC18A2Q05940 514 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 MDH1BQ5I0G3 518 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 CENPIQ92674 756 aaPredicted RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 EBNA1BP2Q99848 306 aaKnown RBP11.31□□□□□ -0.6
SEC31A-228ENST00000509142 MFHAS1Q9Y4C4 1052 aa11.31□□□□□ -0.6
SEC31A-228ENST00000509142 FAM237BA0A1B0GVD1 139 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 A6NHS1 94 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 ZNF487B1APH4 448 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 KIF1CO43896 1103 aaKnown RBP11.3□□□□□ -0.6
SEC31A-228ENST00000509142 LINGO3P0C6S8 592 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 ARFIP2P53365 341 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 TAF1CQ15572 869 aaPredicted RBP11.3□□□□□ -0.6
SEC31A-228ENST00000509142 ACSBG2Q5FVE4 666 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 OSTM1Q86WC4 334 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 QKIQ96PU8 341 aaKnown RBP eCLIP11.3□□□□□ -0.65e-7■■■■□ 20.3
SEC31A-228ENST00000509142 TMEM120AQ9BXJ8 343 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 CEP41Q9BYV8 373 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 PNPLA8Q9NP80 782 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 ARMCX1Q9P291 453 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 HMX2A2RU54 273 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 GSC2O15499 205 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
SEC31A-228ENST00000509142 FAM200BP0CF97 657 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 NOS2P35228 1153 aa11.3□□□□□ -0.6
SEC31A-228ENST00000509142 GRIA1P42261 906 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms