RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 AP3D1O14617 1153 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 PCDH17O14917 1159 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 CLGNO14967 610 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 PEX1O43933 1283 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 USP1O94782 785 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 GNAI3P08754 354 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 FAM200BP0CF97 657 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 MAPK4P31152 587 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 MLH1P40692 756 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 PIK3CAP42336 1068 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 BCAT1P54687 386 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 ALDH18A1P54886 795 aaKnown RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 GNAI1P63096 354 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 IFI35P80217 286 aaPredicted RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 PIGFQ07326 219 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 KRTAP1-1Q07627 177 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 NSUN2Q08J23 767 aaKnown RBP eCLIP5.08□□□□□ -1.6
RFC1-205ENST00000502991 GALNT2Q10471 571 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 ANKRD1Q15327 319 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 CTXN3Q4LDR2 81 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 ATPAF1Q5TC12 328 aaPredicted RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 DCAF12L1Q5VU92 463 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 RAP1GAP2Q684P5 730 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 FBXO42Q6P3S6 717 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 VWA1Q6PCB0 445 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 CRTC1Q6UUV9 634 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 RAB11FIP2Q7L804 512 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 GALNTL5Q7Z4T8 443 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 PRPF39Q86UA1 669 aaKnown RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 MPP5Q8N3R9 675 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 ARL10Q8N8L6 244 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 USP38Q8NB14 1042 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 PCSK9Q8NBP7 692 aaKnown RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 MYCBPAPQ8TBZ2 947 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 NTN5Q8WTR8 489 aaPredicted RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 SCAMP4Q969E2 229 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 FBXL20Q96IG2 436 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 CNDP2Q96KP4 475 aaKnown RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 SPATA17Q96L03 361 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 SMOQ99835 787 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 SYNCQ9H7C4 482 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 EIF2B3Q9NR50 452 aaKnown RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 ETAA1Q9NY74 926 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 RPS6KA6Q9UK32 745 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 TLK1Q9UKI8 766 aa5.08□□□□□ -1.6
RFC1-205ENST00000502991 RRP7AQ9Y3A4 280 aaKnown RBP5.08□□□□□ -1.6
RFC1-205ENST00000502991 SPATA31A6Q5VVP1 1343 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 VWC2LB2RUY7 222 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 TMEM233B4DJY2 109 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 H3BNC9 293 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 M0QYG6 137 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 DNPH1O43598 174 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 TSPAN3O60637 253 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 RASSF9O75901 435 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 RHOP08100 348 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 CHRM2P08172 466 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 CLTBP09497 229 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 PECAM1P16284 738 aaPredicted RBP5.07□□□□□ -1.6
RFC1-205ENST00000502991 PPP3CBP16298 524 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 BTF3P20290 206 aaKnown RBP5.07□□□□□ -1.6
RFC1-205ENST00000502991 SNX16P57768 344 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 POU6F2P78424 691 aaPredicted RBP5.07□□□□□ -1.6
RFC1-205ENST00000502991 CREB5Q02930 508 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 MAMLD1Q13495 774 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 DCTN1Q14203 1278 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 GPR68Q15743 365 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 ERCC6LQ2NKX8 1250 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.07□□□□□ -1.6
RFC1-205ENST00000502991 NAA35Q5VZE5 725 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 TAF2Q6P1X5 1199 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 RRAGAQ7L523 313 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 TMPRSS9Q7Z410 1059 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 ARHGEF25Q86VW2 580 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 ZNF575Q86XF7 245 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 ADGRG3Q86Y34 549 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 PDSS2Q86YH6 399 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 CCDC28AQ8IWP9 274 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 ADSSL1Q8N142 457 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 DNAJC5GQ8N7S2 189 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 SPSB4Q96A44 273 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 SH3KBP1Q96B97 665 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 HIC2Q96JB3 615 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 PKNOX2Q96KN3 472 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 DIAPH3Q9NSV4 1193 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 CFAP97Q9P2B7 532 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 CAPN11Q9UMQ6 739 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 DAPP1Q9UN19 280 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 PCDHGB4Q9UN71 923 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 C19orf53Q9UNZ5 99 aaPredicted RBP5.07□□□□□ -1.6
RFC1-205ENST00000502991 TMEM5Q9Y2B1 443 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 DERAQ9Y315 318 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 INSL6Q9Y581 213 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 ZCCHC6Q5VYS8 1495 aaKnown RBP5.07□□□□□ -1.6
RFC1-205ENST00000502991 LMTK3Q96Q04 1460 aa5.07□□□□□ -1.6
RFC1-205ENST00000502991 ADM5C9JUS6 153 aa5.06□□□□□ -1.6
RFC1-205ENST00000502991 F5H697 171 aa5.06□□□□□ -1.6
RFC1-205ENST00000502991 TSPAN9O75954 239 aa5.06□□□□□ -1.6
RFC1-205ENST00000502991 PGM3O95394 542 aa5.06□□□□□ -1.6
RFC1-205ENST00000502991 NTSR2O95665 410 aa5.06□□□□□ -1.6
RFC1-205ENST00000502991 ELFN1P0C7U0 828 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms