RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TNFRSF18Q9Y5U5 241 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 WNT6Q9Y6F9 365 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC4A4Q9Y6R1 1079 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 NUP98P52948 1817 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 LRRC37A3O60309 1634 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 MST1RQ04912 1400 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 MYH3P11055 1940 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 ATRNL1Q5VV63 1379 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 MYH13Q9UKX3 1938 aa2.23□□□□□ -2.05
SNRNP40-207ENST00000491106 MARF1Q9Y4F3 1742 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PCSK5Q92824 1860 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ADAMTS7Q9UKP4 1686 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 LMTK3Q96Q04 1460 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 A0A087WWV3 80 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 A0A0B4J269 797 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 A0A0G2JLW4 131 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC195A0A1B0GUA6 201 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PVALEFA0A1B0GWK0 134 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ANO9A1A5B4 782 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC78A2IDD5 438 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 WDR91A4D1P6 747 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ERICH4A6NGS2 130 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MANSC4A6NHS7 340 aaPredicted RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC154A6NI56 674 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF785A8K8V0 405 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TMEM232C9JQI7 657 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 GOLGA8KD6RF30 607 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SMIM22K7EJ46 135 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MYO1CO00159 1063 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 QSOX1O00391 747 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 WNT10BO00744 389 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MPPED1O15442 326 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TACC1O75410 805 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 IDH1O75874 414 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SEC31AO94979 1220 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SNUPNO95149 360 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 LCA5LO95447 670 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 GNA14O95837 355 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SYF2O95926 243 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 RPN1P04843 607 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CD1AP06126 327 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PARP1P09874 1014 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SBK3P0C264 359 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SRGNP10124 158 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 EPB41P11171 864 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 FCER1AP12319 257 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TCP1P17987 556 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CHRM3P20309 590 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ITGALP20701 1170 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CCNE1P24864 410 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ADORA1P30542 326 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 HNRNPH3P31942 346 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 GUCY1A2P33402 732 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 IGHMBP2P38935 993 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 IL6STP40189 918 aaPredicted RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 USP8P40818 1118 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PRPHP41219 470 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 UBA7P41226 1012 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 GRIA3P42263 894 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PRCPP42785 496 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MAGEA1P43355 309 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 NPTX2P47972 431 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC6A9P48067 706 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 KCNJ5P48544 419 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 AARSP49588 968 aaKnown RBP eCLIP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 EIF5P55010 431 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 NLRP5P59047 1200 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ZBED6P86452 979 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CDC42EP1Q00587 391 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SATB1Q01826 763 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 DDR1Q08345 913 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TROAPQ12815 778 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PPFIA1Q13136 1202 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 EIF2B5Q13144 721 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ORC2Q13416 577 aaPredicted RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MTM1Q13496 603 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TUBB3Q13509 450 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 DYRK1AQ13627 763 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 KRT31Q15323 416 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PUM3Q15397 648 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CDC37Q16543 378 aaPredicted RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ABCB5Q2M3G0 1257 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 COBLL1Q53SF7 1204 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CAVIN4Q5BKX8 364 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SPECC1Q5M775 1068 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC122Q5T0U0 273 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CLEC4GQ6UXB4 293 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 LRRC31Q6UY01 552 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 RAD9BQ6WBX8 426 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TOGARAM2Q6ZUX3 1019 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TOM1L2Q6ZVM7 507 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MICALCLQ6ZW33 695 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TRAPPC11Q7Z392 1133 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 KIAA1328Q86T90 577 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SRLQ86TD4 932 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PEG10Q86TG7 708 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TTC7BQ86TV6 843 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 DDX42Q86XP3 938 aaKnown RBP eCLIP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CD302Q8IX05 232 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 IFT20Q8IY31 132 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms