RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	APLF	Q8IW19	511 aa	Predicted RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	WDR75	Q8IWA0	830 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	CCDC117	Q8IWD4	279 aa	Predicted RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ADGRF2	Q8IZF7	708 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	THEM5	Q8N1Q8	247 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ARHGAP18	Q8N392	663 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	B3GALNT2	Q8NCR0	500 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SMC1B	Q8NDV3	1235 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	JOSD2	Q8TAC2	188 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	UHMK1	Q8TAS1	419 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	UBA3	Q8TBC4	463 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	TRAPPC12	Q8WVT3	735 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	HTR3C	Q8WXA8	447 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ZNF75CP	Q92670	426 aa	Predicted RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	WNT8B	Q93098	351 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	NT5C3B	Q969T7	300 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	CPB2	Q96IY4	423 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	RSRC1	Q96IZ7	334 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	C7orf26	Q96N11	449 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SPATA13	Q96N96	652 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	TSNARE1	Q96NA8	513 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	QKI	Q96PU8	341 aa	Known RBP eCLIP	6.55	□□□□□ -1.36	1e-42	■□□□□ 9.6
FN1-223	ENST00000490833	SYT17	Q9BSW7	474 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	C11orf84	Q9BUA3	381 aa	Predicted RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	PPP1R12C	Q9BZL4	782 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	WWP1	Q9H0M0	922 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	SDCBP2	Q9H190	292 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	USP29	Q9HBJ7	922 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ZFYVE28	Q9HCC9	887 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	TRPC7	Q9HCX4	862 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	BATF3	Q9NR55	127 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ARHGEF3	Q9NR81	526 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	KCNK4	Q9NYG8	393 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	BFAR	Q9NZS9	450 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	IGSF9	Q9P2J2	1179 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	CTNNAL1	Q9UBT7	734 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	BCAP29	Q9UHQ4	241 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	LNPEP	Q9UIQ6	1025 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	ADAM28	Q9UKQ2	775 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	AP4E1	Q9UPM8	1137 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	GNE	Q9Y223	722 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	AAR2	Q9Y312	384 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	TELO2	Q9Y4R8	837 aa		6.55	□□□□□ -1.36
FN1-223	ENST00000490833	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	6.55	□□□□□ -1.36
FN1-223	ENST00000490833	DOCK5	Q9H7D0	1870 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	TCRBV9S1A1T	A0A576	114 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	CARNS1	A5YM72	827 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	CYB561D2	O14569	222 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	GABRD	O14764	452 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	PAPSS1	O43252	624 aa	Predicted RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	HOXA2	O43364	376 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	RECQL4	O94761	1208 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	ALDH1A2	O94788	518 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	KLHL2	O95198	593 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	APRT	P07741	180 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	ODC1	P11926	461 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	COL6A1	P12109	1028 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	CCDC130	P13994	396 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	PTPN1	P18031	435 aa	Known RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	PGAM1	P18669	254 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	CALB2	P22676	271 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	HOXC8	P31273	242 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	ELK3	P41970	407 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	RAP1GAP	P47736	663 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	SERPINB4	P48594	390 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	KPNA2	P52292	529 aa	Known RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	GTF2A1	P52655	376 aa	Predicted RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	LILRA4	P59901	499 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	IRX4	P78413	519 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	ADAM17	P78536	824 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	ZBTB16	Q05516	673 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	PDE4C	Q08493	712 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	SMARCB1	Q12824	385 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	IFRD2	Q12894	506 aa	Predicted RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	SNX17	Q15036	470 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	PAFAH1B3	Q15102	231 aa	Known RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	QPCT	Q16769	361 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	KIZ	Q2M2Z5	673 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	SMTNL2	Q2TAL5	461 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	NBPF20	Q3BBV1	942 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	C2CD6	Q53TS8	623 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	SPANXN3	Q5MJ09	141 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	GRTP1	Q5TC63	336 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	MAP1S	Q66K74	1059 aa	Predicted RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	TWF2	Q6IBS0	349 aa	Known RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	PMF1	Q6P1K2	205 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	LVRN	Q6Q4G3	990 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	ZC3H18	Q86VM9	953 aa	Known RBP	6.54	□□□□□ -1.36
FN1-223	ENST00000490833	CRLF3	Q8IUI8	442 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	UNC45B	Q8IWX7	931 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	ARFGAP1	Q8N6T3	406 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	EMC1	Q8N766	993 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	MGARP	Q8TDB4	240 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	PPP4R1	Q8TF05	950 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	DCAKD	Q8WVC6	231 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	STON2	Q8WXE9	905 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	KAT2B	Q92831	832 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	COPS5	Q92905	334 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	STAMBPL1	Q96FJ0	436 aa		6.54	□□□□□ -1.36
FN1-223	ENST00000490833	SMARCD1	Q96GM5	515 aa		6.54	□□□□□ -1.36

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