RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 FBXL13Q8NEE6 735 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 RNF139Q8WU17 664 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 ADAMTS14Q8WXS8 1223 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 NDRG1Q92597 394 aaKnown RBP9.8□□□□□ -0.84
SNX17-207ENST00000489402 EEF2KMTQ96G04 330 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 CCDC34Q96HJ3 373 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 PIWIL1Q96J94 861 aaKnown RBP9.8□□□□□ -0.84
SNX17-207ENST00000489402 CAMK1GQ96NX5 476 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 NUP58Q9BVL2 599 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 UBXN6Q9BZV1 441 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 PCED1AQ9H1Q7 454 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 CISHQ9NSE2 258 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 CLEC4EQ9ULY5 219 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 LHX6Q9UPM6 363 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 HPSEQ9Y251 543 aa9.8□□□□□ -0.84
SNX17-207ENST00000489402 BPTFQ12830 3046 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 METTL12A8MUP2 240 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 KCNJ18B7U540 433 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 ZBED1O96006 694 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 IGLV3-19P01714 112 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 EPB41P11171 864 aaKnown RBP9.79□□□□□ -0.84
SNX17-207ENST00000489402 PRKCHP24723 683 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 MATKP42679 507 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 BCAT1P54687 386 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 RAD23BP54727 409 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 YWHAEP62258 255 aaKnown RBP9.79□□□□□ -0.84
SNX17-207ENST00000489402 RING1Q06587 406 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 DPYDQ12882 1025 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 EDRF1Q3B7T1 1238 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 FNDC3BQ53EP0 1204 aaKnown RBP9.79□□□□□ -0.84
SNX17-207ENST00000489402 RAB41Q5JT25 222 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 FAM124AQ86V42 546 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 FAM217AQ8IXS0 508 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 ANKRD52Q8NB46 1076 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 SLC4A11Q8NBS3 891 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 WFIKKN2Q8TEU8 576 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 SETD7Q8WTS6 366 aaKnown RBP9.79□□□□□ -0.84
SNX17-207ENST00000489402 SNX19Q92543 992 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 SEMA4DQ92854 862 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 IPO9Q96P70 1041 aaKnown RBP9.79□□□□□ -0.84
SNX17-207ENST00000489402 ARID3AQ99856 593 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 ULBP1Q9BZM6 244 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 LHX5Q9H2C1 402 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 GAREM1Q9H706 876 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 LRRC4Q9HBW1 653 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 RAB20Q9NX57 234 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 HESX1Q9UBX0 185 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 EIF2B4Q9UI10 523 aaKnown RBP9.79□□□□□ -0.84
SNX17-207ENST00000489402 PLA2G4CQ9UP65 541 aa9.79□□□□□ -0.84
SNX17-207ENST00000489402 SMG1Q96Q15 3661 aaKnown RBP9.78□□□□□ -0.84
SNX17-207ENST00000489402 TULP2O00295 520 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 XPO1O14980 1071 aaKnown RBP9.78□□□□□ -0.84
SNX17-207ENST00000489402 HOXD9P28356 352 aaPredicted RBP9.78□□□□□ -0.84
SNX17-207ENST00000489402 NDUFA8P51970 172 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 COPAP53621 1224 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 PDE4CQ08493 712 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 BST2Q10589 180 aaKnown RBP9.78□□□□□ -0.84
SNX17-207ENST00000489402 CAMK2GQ13555 558 aaPredicted RBP9.78□□□□□ -0.84
SNX17-207ENST00000489402 TEAD4Q15561 434 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 TRIP4Q15650 581 aaPredicted RBP9.78□□□□□ -0.84
SNX17-207ENST00000489402 GOLGA7BQ2TAP0 167 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 SGO2Q562F6 1265 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 TCERG1LQ5VWI1 586 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 PM20D1Q6GTS8 502 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 LRSAM1Q6UWE0 723 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 KRBA2Q6ZNG9 492 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 GLRX5Q86SX6 157 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 PROSER1Q86XN7 944 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 FMNL3Q8IVF7 1028 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 SIX6OS1Q8N1H7 587 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 PNPLA1Q8N8W4 532 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 OR2T3Q8NH03 318 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 SORCS1Q8WY21 1168 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 GOLPH3LQ9H4A5 285 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 FBRSQ9HAH7 460 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 TM7SF3Q9NS93 570 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 TSPAN16Q9UKR8 245 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 PCOLCE2Q9UKZ9 415 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 HBS1LQ9Y450 684 aaKnown RBP9.78□□□□□ -0.84
SNX17-207ENST00000489402 SLCO1B1Q9Y6L6 691 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 CACNA1EQ15878 2313 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 ZFYVE26Q68DK2 2539 aa9.78□□□□□ -0.84
SNX17-207ENST00000489402 FAM237AA0A1B0GTK4 181 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 CETN3O15182 167 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 FLRT2O43155 660 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 TSPAN3O60637 253 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 CBFA2T3O75081 653 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 LATS1O95835 1130 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 CALCAP01258 141 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 DNTTP04053 509 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 SETSIPP0DME0 302 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 HLA-EP13747 358 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 CD19P15391 556 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 AFF3P51826 1226 aaKnown RBP9.77□□□□□ -0.85
SNX17-207ENST00000489402 ADIGQ0VDE8 80 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 SCAPQ12770 1279 aa9.77□□□□□ -0.85
SNX17-207ENST00000489402 COL9A2Q14055 689 aaPredicted RBP9.77□□□□□ -0.85
SNX17-207ENST00000489402 SUZ12Q15022 739 aaKnown RBP9.77□□□□□ -0.85
SNX17-207ENST00000489402 HLA-BQ31612 363 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms