RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 MEA1Q16626 185 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 CCDC153Q494R4 210 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 TAF2Q6P1X5 1199 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 CROTQ9UKG9 612 aa18.04■□□□□ 0.48
NPHP4-209ENST00000489180 FAM20BO75063 409 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 FBXO21O94952 628 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ABCB1P08183 1280 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 AKAP5P24588 427 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ALDH7A1P49419 539 aaKnown RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 RHOAP61586 193 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 SLC22A9Q8IVM8 553 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ANKRD13AQ8IZ07 590 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 LPCAT1Q8NF37 534 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 PYDC1Q8WXC3 89 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 CDRT15Q96T59 188 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 CYP3A43Q9HB55 503 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 GP5P40197 560 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 DLG4P78352 724 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 PRKAA1Q13131 559 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 R3HDM1Q15032 1099 aaKnown RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 AGBL3Q8NEM8 1001 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 APBA2Q99767 749 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 VTA1Q9NP79 307 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 DDX43Q9NXZ2 648 aaKnown RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 C1orf232A0A0U1RR37 186 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 UTP15Q8TED0 518 aaKnown RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 MAGED4Q96JG8 741 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ZBTB45Q96K62 511 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 COPS7BQ9H9Q2 264 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 MID1IP1Q9NPA3 183 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ACP6Q9NPH0 428 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 CYLDQ9NQC7 956 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 COMMD8Q9NX08 183 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 BARX2Q9UMQ3 279 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 EML1O00423 815 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 RHOCP08134 193 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ITGALP20701 1170 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 FGFR3P22607 806 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ABCG1P45844 678 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 CTXN3Q4LDR2 81 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 OTOP1Q7RTM1 612 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 FGD2Q7Z6J4 655 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 STK32AQ8WU08 396 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 RMND5BQ96G75 393 aaPredicted RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 ELOVL6Q9H5J4 265 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 DIP2AQ14689 1571 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 KCNK1O00180 336 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 TRIM13O60858 407 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 STAU1O95793 577 aaKnown RBP18.03■□□□□ 0.48
NPHP4-209ENST00000489180 SHMT1P34896 483 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 SLC12A3P55017 1021 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 PKNOX1P55347 436 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 FBXO47Q5MNV8 452 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 TRPC4APQ8TEL6 797 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 OSBPL10Q9BXB5 764 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 STMN3Q9NZ72 180 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 DAPK2Q9UIK4 370 aa18.03■□□□□ 0.48
NPHP4-209ENST00000489180 PDZK1P1A8MUH7 402 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 ANKRD63C9JTQ0 380 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 F8VP50 259 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 PROCP04070 461 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 PLK1P53350 603 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 MYBPC2Q14324 1141 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 ALFQ53S48 1182 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 CCDC167Q9P0B6 97 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 TUBGCP4Q9UGJ1 667 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 PADI4Q9UM07 663 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 GTF2A1LQ9UNN4 478 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 GPR182O15218 404 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 USP12O75317 370 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 VAPBO95292 243 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 FCGR1AP12314 374 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 CAMK2GQ13555 558 aaPredicted RBP18.02■□□□□ 0.48
NPHP4-209ENST00000489180 MAPK11Q15759 364 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 CHMP1BQ7LBR1 199 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 NECAB2Q7Z6G3 386 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 CLVS1Q8IUQ0 354 aaPredicted RBP18.02■□□□□ 0.48
NPHP4-209ENST00000489180 FUKQ8N0W3 1084 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 GTF3C2Q8WUA4 911 aaPredicted RBP18.02■□□□□ 0.48
NPHP4-209ENST00000489180 NMRK1Q9NWW6 199 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 RAD54BQ9Y620 910 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 GAKO14976 1311 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 ZNF862O60290 1169 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 HMGCRP04035 888 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 THP07101 528 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 CDH17Q12864 832 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 C16orf72Q14CZ0 275 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 EML3Q32P44 896 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 TERB1Q8NA31 727 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 KAT5Q92993 513 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 COLEC11Q9BWP8 271 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 ACTR8Q9H981 624 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 TBC1D13Q9NVG8 400 aa18.02■□□□□ 0.48
NPHP4-209ENST00000489180 VIL1P09327 827 aaKnown RBP18.02■□□□□ 0.47
NPHP4-209ENST00000489180 CCR1P32246 355 aa18.02■□□□□ 0.47
NPHP4-209ENST00000489180 ZNF470Q6ECI4 717 aa18.02■□□□□ 0.47
NPHP4-209ENST00000489180 FNDC5Q8NAU1 212 aa18.02■□□□□ 0.47
NPHP4-209ENST00000489180 TRAPPC12Q8WVT3 735 aa18.02■□□□□ 0.47
NPHP4-209ENST00000489180 VPS33AQ96AX1 596 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms