RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SIPA1Q96FS4 1042 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 PIWIL1Q96J94 861 aaKnown RBP15.08■□□□□ 0
SMARCE1-209ENST00000478349 ZDHHC5Q9C0B5 715 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 PCED1AQ9H1Q7 454 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 CD248Q9HCU0 757 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 TMEM74BQ9NUR3 256 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 HCN2Q9UL51 889 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 PLA2G4CQ9UP65 541 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 GTF3C3Q9Y5Q9 886 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 ATG2BQ96BY7 2078 aa15.08■□□□□ 0
SMARCE1-209ENST00000478349 EML5Q05BV3 1969 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 ARHGAP33O14559 1287 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 ATP5BP06576 529 aaKnown RBP15.07■□□□□ 0
SMARCE1-209ENST00000478349 EPHX1P07099 455 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 LCP1P13796 627 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 PMS1P54277 932 aaKnown RBP15.07■□□□□ 0
SMARCE1-209ENST00000478349 GCNT1Q02742 428 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 SLC14A1Q13336 389 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 ENPP2Q13822 863 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 ZNF234Q14588 700 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 CNGA2Q16280 664 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 GEN1Q17RS7 908 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 MPP7Q5T2T1 576 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 KLHL10Q6JEL2 608 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 AHI1Q8N157 1196 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 EDEM1Q92611 657 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 TMA16Q96EY4 203 aaKnown RBP15.07■□□□□ 0
SMARCE1-209ENST00000478349 ZNF419Q96HQ0 510 aaPredicted RBP15.07■□□□□ 0
SMARCE1-209ENST00000478349 HSFY1Q96LI6 401 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 FAM81BQ96LP2 452 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 CAPN10Q9HC96 672 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 USP36Q9P275 1121 aaKnown RBP15.07■□□□□ 0
SMARCE1-209ENST00000478349 STOML2Q9UJZ1 356 aa15.07■□□□□ 0
SMARCE1-209ENST00000478349 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.07■□□□□ 0
SMARCE1-209ENST00000478349 CNOT1A5YKK6 2376 aaKnown RBP15.07■□□□□ 0
SMARCE1-209ENST00000478349 YJEFN3A6XGL0 299 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 E7ENQ6 273 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 H0Y626 953 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 TRIM16O95361 564 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 IL12RB1P42701 662 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 DAOAP59103 153 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 RING1Q06587 406 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 FOXC1Q12948 553 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 PLEKHG6Q3KR16 790 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 FNDC3BQ53EP0 1204 aaKnown RBP15.06■□□□□ 0
SMARCE1-209ENST00000478349 MSANTD2Q6P1R3 559 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 TMPRSS6Q8IU80 811 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 MINDY1Q8N5J2 469 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 DEFB119Q8N690 84 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 UBR7Q8N806 425 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 RBBP8NLQ8NC74 664 aaPredicted RBP15.06■□□□□ 0
SMARCE1-209ENST00000478349 DEFB124Q8NES8 71 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 UBA3Q8TBC4 463 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 NELFBQ8WX92 580 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 SERPINB11Q96P15 392 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 NUP58Q9BVL2 599 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 ITM2CQ9NQX7 267 aa15.06■□□□□ 0
SMARCE1-209ENST00000478349 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.06■□□□□ 0
SMARCE1-209ENST00000478349 A0A1B0GTW7 788 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 TMEM8BA6NDV4 472 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 WASH3PC4AMC7 463 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 TULP2O00295 520 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 MED7O43513 233 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 LTFP02788 710 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 NCAM1P13591 858 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 HOXD9P28356 352 aaPredicted RBP15.05■□□□□ -0
SMARCE1-209ENST00000478349 ACADSBP45954 432 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 ZBTB16Q05516 673 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 SFSWAPQ12872 951 aaKnown RBP15.05■□□□□ -0
SMARCE1-209ENST00000478349 PAK1Q13153 545 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 NNTQ13423 1086 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 MEA1Q16626 185 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 TTC31Q49AM3 519 aaPredicted RBP15.05■□□□□ -0
SMARCE1-209ENST00000478349 PKDCCQ504Y2 493 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 ENOSF1Q7L5Y1 443 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 BHLHA9Q7RTU4 235 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 SLC41A1Q8IVJ1 513 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
SMARCE1-209ENST00000478349 TOE1Q96GM8 510 aaKnown RBP15.05■□□□□ -0
SMARCE1-209ENST00000478349 WSB2Q9NYS7 404 aaPredicted RBP15.05■□□□□ -0
SMARCE1-209ENST00000478349 SFMBT1Q9UHJ3 866 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 GGA2Q9UJY4 613 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 MAN1B1Q9UKM7 699 aa15.05■□□□□ -0
SMARCE1-209ENST00000478349 CHD8Q9HCK8 2581 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 GIPC1O14908 333 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 IGLV3-19P01714 112 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 AFPP02771 609 aaKnown RBP15.04■□□□□ -0
SMARCE1-209ENST00000478349 PABPC1P11940 636 aaKnown RBP15.04■□□□□ -0
SMARCE1-209ENST00000478349 RGS7P49802 495 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 TPMTP51580 245 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 TBX4P57082 545 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 ST8SIA6P61647 398 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 SIM1P81133 766 aaPredicted RBP15.04■□□□□ -0
SMARCE1-209ENST00000478349 SEMA3BQ13214 749 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 TTI2Q6NXR4 508 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 IL27RAQ6UWB1 636 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 CHST9Q7L1S5 443 aa15.04■□□□□ -0
SMARCE1-209ENST00000478349 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.04■□□□□ -0
SMARCE1-209ENST00000478349 HJURPQ8NCD3 748 aaPredicted RBP15.04■□□□□ -0
SMARCE1-209ENST00000478349 OR2T3Q8NH03 318 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms